Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.34□□□□□ -0.27
Timp3P39876 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.34□□□□□ -0.27
Timp3P39876 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Timp3P39876 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Timp3P39876 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Timp3P39876 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.34□□□□□ -0.27
Timp3P39876 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Timp3P39876 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Timp3P39876 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Timp3P39876 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Timp3P39876 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Timp3P39876 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Timp3P39876 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Timp3P39876 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Timp3P39876 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Timp3P39876 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Timp3P39876 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.33□□□□□ -0.28
Timp3P39876 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Timp3P39876 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.33□□□□□ -0.28
Timp3P39876 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Timp3P39876 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Timp3P39876 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Timp3P39876 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Timp3P39876 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Timp3P39876 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Timp3P39876 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Timp3P39876 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Timp3P39876 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Timp3P39876 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.33□□□□□ -0.28
Timp3P39876 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Timp3P39876 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Timp3P39876 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.32□□□□□ -0.28
Timp3P39876 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Timp3P39876 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Timp3P39876 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.32□□□□□ -0.28
Timp3P39876 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Timp3P39876 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Timp3P39876 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.32□□□□□ -0.28
Timp3P39876 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Timp3P39876 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.32□□□□□ -0.28
Timp3P39876 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Timp3P39876 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.32□□□□□ -0.28
Timp3P39876 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Timp3P39876 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.32□□□□□ -0.28
Timp3P39876 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Timp3P39876 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Timp3P39876 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Gm7153-201ENSMUST00000117092 455 ntBASIC13.31□□□□□ -0.28
Timp3P39876 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Timp3P39876 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms