Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LdlrP35951 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.23■□□□□ 0.19
LdlrP35951 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LdlrP35951 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LdlrP35951 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LdlrP35951 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.22■□□□□ 0.19
LdlrP35951 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LdlrP35951 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LdlrP35951 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.22■□□□□ 0.19
LdlrP35951 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LdlrP35951 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.22■□□□□ 0.19
LdlrP35951 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LdlrP35951 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LdlrP35951 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LdlrP35951 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.21■□□□□ 0.19
LdlrP35951 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LdlrP35951 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LdlrP35951 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LdlrP35951 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.21■□□□□ 0.19
LdlrP35951 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LdlrP35951 Gm12085-201ENSMUST00000119263 940 ntBASIC16.21■□□□□ 0.19
LdlrP35951 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LdlrP35951 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LdlrP35951 Gm18958-201ENSMUST00000174258 762 ntBASIC16.21■□□□□ 0.19
LdlrP35951 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.21■□□□□ 0.19
LdlrP35951 Gm27463-201ENSMUST00000183569 57 ntBASIC16.21■□□□□ 0.19
LdlrP35951 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LdlrP35951 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LdlrP35951 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LdlrP35951 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LdlrP35951 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LdlrP35951 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LdlrP35951 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LdlrP35951 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
LdlrP35951 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LdlrP35951 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
LdlrP35951 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LdlrP35951 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LdlrP35951 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LdlrP35951 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LdlrP35951 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
LdlrP35951 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LdlrP35951 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.2■□□□□ 0.18
LdlrP35951 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LdlrP35951 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LdlrP35951 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LdlrP35951 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LdlrP35951 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LdlrP35951 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LdlrP35951 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LdlrP35951 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LdlrP35951 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LdlrP35951 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LdlrP35951 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LdlrP35951 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LdlrP35951 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
LdlrP35951 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.19■□□□□ 0.18
LdlrP35951 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.19■□□□□ 0.18
LdlrP35951 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.19■□□□□ 0.18
LdlrP35951 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LdlrP35951 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LdlrP35951 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LdlrP35951 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.19■□□□□ 0.18
LdlrP35951 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LdlrP35951 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LdlrP35951 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LdlrP35951 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LdlrP35951 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.19■□□□□ 0.18
LdlrP35951 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LdlrP35951 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LdlrP35951 Gm38027-201ENSMUST00000192315 235 ntBASIC16.19■□□□□ 0.18
LdlrP35951 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.19■□□□□ 0.18
LdlrP35951 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LdlrP35951 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LdlrP35951 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LdlrP35951 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms