Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Rab5cP35278 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.34□□□□□ -0.27
Rab5cP35278 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Rab5cP35278 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Rab5cP35278 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rab5cP35278 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.34□□□□□ -0.27
Rab5cP35278 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rab5cP35278 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Rab5cP35278 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Rab5cP35278 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Rab5cP35278 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Rab5cP35278 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.33□□□□□ -0.28
Rab5cP35278 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.33□□□□□ -0.28
Rab5cP35278 AC093043.1-201ENSMUST00000226700 898 ntBASIC13.33□□□□□ -0.28
Rab5cP35278 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rab5cP35278 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rab5cP35278 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rab5cP35278 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rab5cP35278 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Rab5cP35278 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rab5cP35278 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rab5cP35278 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.32□□□□□ -0.28
Rab5cP35278 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.32□□□□□ -0.28
Rab5cP35278 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab5cP35278 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rab5cP35278 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab5cP35278 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab5cP35278 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rab5cP35278 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab5cP35278 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rab5cP35278 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab5cP35278 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab5cP35278 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab5cP35278 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab5cP35278 Gm14117-201ENSMUST00000122417 843 ntBASIC13.32□□□□□ -0.28
Rab5cP35278 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rab5cP35278 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Rab5cP35278 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.32□□□□□ -0.28
Rab5cP35278 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.32□□□□□ -0.28
Rab5cP35278 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab5cP35278 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab5cP35278 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rab5cP35278 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab5cP35278 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.32□□□□□ -0.28
Rab5cP35278 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.32□□□□□ -0.28
Rab5cP35278 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab5cP35278 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab5cP35278 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab5cP35278 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Rab5cP35278 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Rab5cP35278 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.32□□□□□ -0.28
Rab5cP35278 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rab5cP35278 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab5cP35278 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rab5cP35278 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rab5cP35278 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab5cP35278 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab5cP35278 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab5cP35278 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rab5cP35278 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Rab5cP35278 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rab5cP35278 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rab5cP35278 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms