Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Gm25016-201ENSMUST00000158399 131 ntBASIC15.48■□□□□ 0.07
Slc6a11P31650 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc6a11P31650 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc6a11P31650 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc6a11P31650 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc6a11P31650 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc6a11P31650 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Slc6a11P31650 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc6a11P31650 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc6a11P31650 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Slc6a11P31650 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.48■□□□□ 0.07
Slc6a11P31650 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Slc6a11P31650 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.47■□□□□ 0.07
Slc6a11P31650 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Slc6a11P31650 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.47■□□□□ 0.07
Slc6a11P31650 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.47■□□□□ 0.07
Slc6a11P31650 Gm22697-201ENSMUST00000175194 63 ntBASIC15.47■□□□□ 0.07
Slc6a11P31650 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Slc6a11P31650 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Ank2-226ENSMUST00000189368 339 ntBASIC15.47■□□□□ 0.07
Slc6a11P31650 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.47■□□□□ 0.07
Slc6a11P31650 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Slc6a11P31650 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Slc6a11P31650 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Slc6a11P31650 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc6a11P31650 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Slc6a11P31650 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.46■□□□□ 0.07
Slc6a11P31650 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc6a11P31650 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Slc6a11P31650 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc6a11P31650 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc6a11P31650 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc6a11P31650 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc6a11P31650 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Slc6a11P31650 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Slc6a11P31650 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Slc6a11P31650 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc6a11P31650 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Slc6a11P31650 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Slc6a11P31650 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Slc6a11P31650 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.46■□□□□ 0.07
Slc6a11P31650 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Slc6a11P31650 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Slc6a11P31650 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Slc6a11P31650 Il3ra-202ENSMUST00000223589 738 ntBASIC15.46■□□□□ 0.07
Slc6a11P31650 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Slc6a11P31650 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Slc6a11P31650 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc6a11P31650 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc6a11P31650 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Slc6a11P31650 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Slc6a11P31650 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.46■□□□□ 0.07
Slc6a11P31650 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.46■□□□□ 0.06
Slc6a11P31650 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.46■□□□□ 0.06
Slc6a11P31650 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Slc6a11P31650 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc6a11P31650 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc6a11P31650 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc6a11P31650 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc6a11P31650 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Slc6a11P31650 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc6a11P31650 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc6a11P31650 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc6a11P31650 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc6a11P31650 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Slc6a11P31650 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Slc6a11P31650 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.45■□□□□ 0.06
Slc6a11P31650 Gm18958-201ENSMUST00000174258 762 ntBASIC15.45■□□□□ 0.06
Slc6a11P31650 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Slc6a11P31650 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Slc6a11P31650 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.45■□□□□ 0.06
Slc6a11P31650 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Slc6a11P31650 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc6a11P31650 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc6a11P31650 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc6a11P31650 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Slc6a11P31650 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc6a11P31650 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Slc6a11P31650 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Slc6a11P31650 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms