Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PdgfbP31240 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PdgfbP31240 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PdgfbP31240 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PdgfbP31240 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.25■□□□□ 0.19
PdgfbP31240 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
PdgfbP31240 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PdgfbP31240 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.25■□□□□ 0.19
PdgfbP31240 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PdgfbP31240 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.25■□□□□ 0.19
PdgfbP31240 Gm20949-201ENSMUST00000206478 952 ntBASIC16.25■□□□□ 0.19
PdgfbP31240 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PdgfbP31240 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PdgfbP31240 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PdgfbP31240 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PdgfbP31240 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PdgfbP31240 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.24■□□□□ 0.19
PdgfbP31240 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PdgfbP31240 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PdgfbP31240 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.24■□□□□ 0.19
PdgfbP31240 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PdgfbP31240 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.24■□□□□ 0.19
PdgfbP31240 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.24■□□□□ 0.19
PdgfbP31240 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PdgfbP31240 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PdgfbP31240 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PdgfbP31240 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PdgfbP31240 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PdgfbP31240 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PdgfbP31240 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PdgfbP31240 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PdgfbP31240 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PdgfbP31240 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PdgfbP31240 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.23■□□□□ 0.19
PdgfbP31240 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PdgfbP31240 Gm37153-201ENSMUST00000193637 231 ntBASIC16.23■□□□□ 0.19
PdgfbP31240 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.23■□□□□ 0.19
PdgfbP31240 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PdgfbP31240 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.23■□□□□ 0.19
PdgfbP31240 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PdgfbP31240 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.23■□□□□ 0.19
PdgfbP31240 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PdgfbP31240 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfbP31240 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfbP31240 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.22■□□□□ 0.19
PdgfbP31240 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfbP31240 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfbP31240 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfbP31240 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfbP31240 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfbP31240 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfbP31240 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Gm13597-201ENSMUST00000121239 375 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfbP31240 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfbP31240 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Gm8825-201ENSMUST00000182565 998 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Gm4518-201ENSMUST00000182638 718 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PdgfbP31240 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.22■□□□□ 0.19
PdgfbP31240 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfbP31240 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfbP31240 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfbP31240 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PdgfbP31240 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.22■□□□□ 0.19
PdgfbP31240 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfbP31240 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfbP31240 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PdgfbP31240 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms