Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.43□□□□□ -0.1
Cd28P31041 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Cd28P31041 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cd28P31041 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Cd28P31041 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cd28P31041 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Cd28P31041 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Cd28P31041 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd28P31041 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Cd28P31041 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd28P31041 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.42□□□□□ -0.1
Cd28P31041 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd28P31041 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.42□□□□□ -0.1
Cd28P31041 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd28P31041 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Cd28P31041 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd28P31041 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.42□□□□□ -0.1
Cd28P31041 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.42□□□□□ -0.1
Cd28P31041 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cd28P31041 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cd28P31041 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cd28P31041 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cd28P31041 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd28P31041 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.42□□□□□ -0.1
Cd28P31041 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd28P31041 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.42□□□□□ -0.1
Cd28P31041 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd28P31041 Sybu-209ENSMUST00000228639 4113 ntBASIC14.42□□□□□ -0.1
Cd28P31041 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Cd28P31041 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd28P31041 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd28P31041 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cd28P31041 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cd28P31041 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd28P31041 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd28P31041 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd28P31041 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd28P31041 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd28P31041 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.41□□□□□ -0.1
Cd28P31041 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cd28P31041 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Cd28P31041 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cd28P31041 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd28P31041 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd28P31041 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd28P31041 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cd28P31041 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cd28P31041 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Cd28P31041 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Cd28P31041 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd28P31041 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd28P31041 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd28P31041 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd28P31041 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.4□□□□□ -0.1
Cd28P31041 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Cd28P31041 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cd28P31041 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.4□□□□□ -0.1
Cd28P31041 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.4□□□□□ -0.1
Cd28P31041 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd28P31041 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd28P31041 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd28P31041 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd28P31041 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd28P31041 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd28P31041 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cd28P31041 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.4□□□□□ -0.1
Cd28P31041 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd28P31041 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cd28P31041 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
Cd28P31041 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd28P31041 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd28P31041 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cd28P31041 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd28P31041 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd28P31041 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd28P31041 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd28P31041 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.39□□□□□ -0.11
Cd28P31041 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.39□□□□□ -0.11
Cd28P31041 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd28P31041 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd28P31041 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd28P31041 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd28P31041 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd28P31041 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd28P31041 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cd28P31041 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd28P31041 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd28P31041 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cd28P31041 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cd28P31041 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms