Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vcam1P29533 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vcam1P29533 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vcam1P29533 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Vcam1P29533 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vcam1P29533 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vcam1P29533 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vcam1P29533 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.67■□□□□ 0.58
Vcam1P29533 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vcam1P29533 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vcam1P29533 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vcam1P29533 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Vcam1P29533 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vcam1P29533 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vcam1P29533 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vcam1P29533 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vcam1P29533 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Vcam1P29533 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.66■□□□□ 0.58
Vcam1P29533 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vcam1P29533 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Vcam1P29533 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vcam1P29533 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vcam1P29533 Gm27646-201ENSMUST00000183989 110 ntBASIC18.66■□□□□ 0.58
Vcam1P29533 Gm8000-201ENSMUST00000188378 592 ntBASIC18.66■□□□□ 0.58
Vcam1P29533 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.66■□□□□ 0.58
Vcam1P29533 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vcam1P29533 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vcam1P29533 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vcam1P29533 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Vcam1P29533 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vcam1P29533 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vcam1P29533 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcam1P29533 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcam1P29533 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcam1P29533 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcam1P29533 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.65■□□□□ 0.58
Vcam1P29533 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm13216-201ENSMUST00000117145 591 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm7222-201ENSMUST00000117512 906 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.65■□□□□ 0.58
Vcam1P29533 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm8825-201ENSMUST00000182565 998 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm4518-201ENSMUST00000182638 718 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm37935-201ENSMUST00000192012 982 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.65■□□□□ 0.58
Vcam1P29533 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.65■□□□□ 0.58
Vcam1P29533 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Vcam1P29533 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcam1P29533 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vcam1P29533 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcam1P29533 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vcam1P29533 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Vcam1P29533 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vcam1P29533 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vcam1P29533 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Vcam1P29533 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Vcam1P29533 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
Vcam1P29533 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.64■□□□□ 0.57
Vcam1P29533 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.64■□□□□ 0.57
Vcam1P29533 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.64■□□□□ 0.57
Vcam1P29533 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.64■□□□□ 0.57
Vcam1P29533 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcam1P29533 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcam1P29533 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcam1P29533 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vcam1P29533 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcam1P29533 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcam1P29533 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Vcam1P29533 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcam1P29533 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vcam1P29533 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcam1P29533 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vcam1P29533 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vcam1P29533 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcam1P29533 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcam1P29533 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vcam1P29533 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcam1P29533 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcam1P29533 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.63■□□□□ 0.57
Vcam1P29533 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.63■□□□□ 0.57
Vcam1P29533 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.63■□□□□ 0.57
Vcam1P29533 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.63■□□□□ 0.57
Vcam1P29533 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.63■□□□□ 0.57
Vcam1P29533 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcam1P29533 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcam1P29533 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcam1P29533 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vcam1P29533 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms