Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.19■□□□□ 0.18
Nckap1P28660 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.19■□□□□ 0.18
Nckap1P28660 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Nckap1P28660 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.19■□□□□ 0.18
Nckap1P28660 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Nckap1P28660 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Nckap1P28660 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.18■□□□□ 0.18
Nckap1P28660 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.18■□□□□ 0.18
Nckap1P28660 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.18■□□□□ 0.18
Nckap1P28660 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Nckap1P28660 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.18■□□□□ 0.18
Nckap1P28660 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Nckap1P28660 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Nckap1P28660 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nckap1P28660 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Nckap1P28660 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nckap1P28660 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nckap1P28660 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Nckap1P28660 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nckap1P28660 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.17■□□□□ 0.18
Nckap1P28660 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Nckap1P28660 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.17■□□□□ 0.18
Nckap1P28660 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nckap1P28660 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.17■□□□□ 0.18
Nckap1P28660 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.17■□□□□ 0.18
Nckap1P28660 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.17■□□□□ 0.18
Nckap1P28660 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nckap1P28660 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nckap1P28660 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Nckap1P28660 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nckap1P28660 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nckap1P28660 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.17■□□□□ 0.18
Nckap1P28660 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nckap1P28660 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nckap1P28660 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nckap1P28660 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nckap1P28660 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nckap1P28660 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nckap1P28660 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nckap1P28660 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nckap1P28660 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Nckap1P28660 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nckap1P28660 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.15■□□□□ 0.18
Nckap1P28660 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nckap1P28660 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nckap1P28660 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nckap1P28660 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.15■□□□□ 0.18
Nckap1P28660 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nckap1P28660 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nckap1P28660 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.15■□□□□ 0.18
Nckap1P28660 Gm25745-201ENSMUST00000174945 133 ntBASIC16.15■□□□□ 0.18
Nckap1P28660 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nckap1P28660 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nckap1P28660 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.15■□□□□ 0.18
Nckap1P28660 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.15■□□□□ 0.18
Nckap1P28660 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Nckap1P28660 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nckap1P28660 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms