Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ccl6P27784 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.72□□□□□ -0.37
Ccl6P27784 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ccl6P27784 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccl6P27784 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccl6P27784 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.72□□□□□ -0.37
Ccl6P27784 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Ccl6P27784 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl6P27784 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl6P27784 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl6P27784 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl6P27784 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl6P27784 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl6P27784 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl6P27784 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl6P27784 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl6P27784 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl6P27784 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccl6P27784 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl6P27784 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl6P27784 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccl6P27784 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccl6P27784 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl6P27784 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl6P27784 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl6P27784 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
Ccl6P27784 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccl6P27784 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Ccl6P27784 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ccl6P27784 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl6P27784 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl6P27784 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Ccl6P27784 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.71□□□□□ -0.38
Ccl6P27784 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl6P27784 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl6P27784 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl6P27784 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccl6P27784 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccl6P27784 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccl6P27784 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccl6P27784 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccl6P27784 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccl6P27784 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccl6P27784 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccl6P27784 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Mir7071-201ENSMUST00000184847 69 ntBASIC12.7□□□□□ -0.38
Ccl6P27784 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ccl6P27784 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccl6P27784 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccl6P27784 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.7□□□□□ -0.38
Ccl6P27784 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccl6P27784 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl6P27784 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl6P27784 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl6P27784 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl6P27784 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl6P27784 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl6P27784 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl6P27784 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl6P27784 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl6P27784 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccl6P27784 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms