Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cd40P27512 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Cd40P27512 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.74□□□□□ -0.05
Cd40P27512 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.74□□□□□ -0.05
Cd40P27512 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.74□□□□□ -0.05
Cd40P27512 Gm33142-201ENSMUST00000193913 867 ntBASIC14.74□□□□□ -0.05
Cd40P27512 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cd40P27512 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.74□□□□□ -0.05
Cd40P27512 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.74□□□□□ -0.05
Cd40P27512 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.74□□□□□ -0.05
Cd40P27512 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cd40P27512 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cd40P27512 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Cd40P27512 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Cd40P27512 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.73□□□□□ -0.05
Cd40P27512 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cd40P27512 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.73□□□□□ -0.05
Cd40P27512 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cd40P27512 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.72□□□□□ -0.05
Cd40P27512 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cd40P27512 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Gm15794-201ENSMUST00000120182 631 ntBASIC14.72□□□□□ -0.05
Cd40P27512 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Cd40P27512 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.72□□□□□ -0.05
Cd40P27512 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Cd40P27512 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.72□□□□□ -0.05
Cd40P27512 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.72□□□□□ -0.05
Cd40P27512 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cd40P27512 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cd40P27512 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cd40P27512 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cd40P27512 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Cd40P27512 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Cd40P27512 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cd40P27512 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cd40P27512 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cd40P27512 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Cd40P27512 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cd40P27512 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cd40P27512 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cd40P27512 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Cd40P27512 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.71□□□□□ -0.05
Cd40P27512 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cd40P27512 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.71□□□□□ -0.05
Cd40P27512 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.71□□□□□ -0.05
Cd40P27512 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.71□□□□□ -0.05
Cd40P27512 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cd40P27512 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cd40P27512 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms