Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.73■□□□□ 0.43
Pde6bP23440 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6bP23440 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6bP23440 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6bP23440 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6bP23440 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6bP23440 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6bP23440 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6bP23440 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.72■□□□□ 0.43
Pde6bP23440 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pde6bP23440 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.72■□□□□ 0.43
Pde6bP23440 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.72■□□□□ 0.43
Pde6bP23440 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pde6bP23440 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Gm27867-201ENSMUST00000184778 125 ntBASIC17.72■□□□□ 0.43
Pde6bP23440 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.72■□□□□ 0.43
Pde6bP23440 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pde6bP23440 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
Pde6bP23440 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pde6bP23440 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pde6bP23440 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6bP23440 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6bP23440 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Pde6bP23440 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6bP23440 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6bP23440 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6bP23440 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Pde6bP23440 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6bP23440 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6bP23440 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6bP23440 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6bP23440 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.71■□□□□ 0.43
Pde6bP23440 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6bP23440 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6bP23440 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.71■□□□□ 0.43
Pde6bP23440 AW822252-206ENSMUST00000208904 237 ntBASIC17.71■□□□□ 0.43
Pde6bP23440 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.71■□□□□ 0.43
Pde6bP23440 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6bP23440 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6bP23440 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pde6bP23440 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pde6bP23440 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pde6bP23440 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6bP23440 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6bP23440 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6bP23440 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6bP23440 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6bP23440 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6bP23440 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.7■□□□□ 0.42
Pde6bP23440 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pde6bP23440 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6bP23440 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.7■□□□□ 0.42
Pde6bP23440 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.7■□□□□ 0.42
Pde6bP23440 Gm6376-201ENSMUST00000209407 580 ntBASIC17.7■□□□□ 0.42
Pde6bP23440 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.7■□□□□ 0.42
Pde6bP23440 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pde6bP23440 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.7■□□□□ 0.42
Pde6bP23440 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Pde6bP23440 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6bP23440 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6bP23440 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Pde6bP23440 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6bP23440 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6bP23440 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.69■□□□□ 0.42
Pde6bP23440 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.69■□□□□ 0.42
Pde6bP23440 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pde6bP23440 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.69■□□□□ 0.42
Pde6bP23440 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.69■□□□□ 0.42
Pde6bP23440 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6bP23440 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.69■□□□□ 0.42
Pde6bP23440 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms