Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sdc1P18828 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.44□□□□□ -0.26
Sdc1P18828 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Sdc1P18828 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sdc1P18828 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Sdc1P18828 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sdc1P18828 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sdc1P18828 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sdc1P18828 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sdc1P18828 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sdc1P18828 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sdc1P18828 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sdc1P18828 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sdc1P18828 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sdc1P18828 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sdc1P18828 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sdc1P18828 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sdc1P18828 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sdc1P18828 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sdc1P18828 Gm2399-201ENSMUST00000104944 225 ntBASIC13.43□□□□□ -0.26
Sdc1P18828 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sdc1P18828 Gm42778-201ENSMUST00000199644 553 ntBASIC13.43□□□□□ -0.26
Sdc1P18828 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.43□□□□□ -0.26
Sdc1P18828 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.43□□□□□ -0.26
Sdc1P18828 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sdc1P18828 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sdc1P18828 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sdc1P18828 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sdc1P18828 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sdc1P18828 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sdc1P18828 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sdc1P18828 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sdc1P18828 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Sdc1P18828 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.43□□□□□ -0.26
Sdc1P18828 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sdc1P18828 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sdc1P18828 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sdc1P18828 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sdc1P18828 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sdc1P18828 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sdc1P18828 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sdc1P18828 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.42□□□□□ -0.26
Sdc1P18828 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sdc1P18828 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.42□□□□□ -0.26
Sdc1P18828 Gm13234-201ENSMUST00000120010 747 ntBASIC13.42□□□□□ -0.26
Sdc1P18828 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sdc1P18828 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.42□□□□□ -0.26
Sdc1P18828 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sdc1P18828 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sdc1P18828 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sdc1P18828 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sdc1P18828 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Sdc1P18828 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sdc1P18828 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sdc1P18828 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sdc1P18828 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sdc1P18828 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sdc1P18828 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sdc1P18828 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sdc1P18828 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sdc1P18828 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sdc1P18828 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sdc1P18828 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Sdc1P18828 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sdc1P18828 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sdc1P18828 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sdc1P18828 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sdc1P18828 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.41□□□□□ -0.26
Sdc1P18828 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sdc1P18828 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Sdc1P18828 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sdc1P18828 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.41□□□□□ -0.26
Sdc1P18828 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sdc1P18828 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.41□□□□□ -0.26
Sdc1P18828 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sdc1P18828 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sdc1P18828 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.41□□□□□ -0.26
Sdc1P18828 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sdc1P18828 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Sdc1P18828 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
Sdc1P18828 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sdc1P18828 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sdc1P18828 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sdc1P18828 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sdc1P18828 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sdc1P18828 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sdc1P18828 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sdc1P18828 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.4□□□□□ -0.26
Sdc1P18828 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sdc1P18828 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sdc1P18828 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sdc1P18828 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sdc1P18828 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.4□□□□□ -0.26
Sdc1P18828 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sdc1P18828 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Sdc1P18828 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Sdc1P18828 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sdc1P18828 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Sdc1P18828 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sdc1P18828 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms