Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Usp53P15975 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Usp53P15975 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Usp53P15975 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Usp53P15975 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp53P15975 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Usp53P15975 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp53P15975 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp53P15975 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp53P15975 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Usp53P15975 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp53P15975 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp53P15975 Gm13884-201ENSMUST00000118103 829 ntBASIC18.81■□□□□ 0.6
Usp53P15975 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp53P15975 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp53P15975 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp53P15975 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp53P15975 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp53P15975 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp53P15975 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp53P15975 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp53P15975 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.8■□□□□ 0.6
Usp53P15975 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp53P15975 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp53P15975 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp53P15975 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp53P15975 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp53P15975 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Usp53P15975 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp53P15975 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp53P15975 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.8■□□□□ 0.6
Usp53P15975 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp53P15975 Gm25745-201ENSMUST00000174945 133 ntBASIC18.8■□□□□ 0.6
Usp53P15975 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.8■□□□□ 0.6
Usp53P15975 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp53P15975 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Usp53P15975 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp53P15975 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp53P15975 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Usp53P15975 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp53P15975 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp53P15975 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp53P15975 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.79■□□□□ 0.6
Usp53P15975 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp53P15975 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Usp53P15975 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp53P15975 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp53P15975 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.79■□□□□ 0.6
Usp53P15975 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp53P15975 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp53P15975 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Usp53P15975 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Usp53P15975 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp53P15975 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp53P15975 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp53P15975 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp53P15975 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.78■□□□□ 0.6
Usp53P15975 Mir8098-201ENSMUST00000184011 137 ntBASIC18.78■□□□□ 0.6
Usp53P15975 Gm28659-201ENSMUST00000188013 759 ntBASIC18.78■□□□□ 0.6
Usp53P15975 Gm7506-201ENSMUST00000207758 815 ntBASIC18.78■□□□□ 0.6
Usp53P15975 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.78■□□□□ 0.6
Usp53P15975 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.78■□□□□ 0.6
Usp53P15975 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Usp53P15975 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp53P15975 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp53P15975 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Usp53P15975 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp53P15975 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp53P15975 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp53P15975 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp53P15975 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp53P15975 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.77■□□□□ 0.6
Usp53P15975 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp53P15975 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Usp53P15975 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp53P15975 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp53P15975 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp53P15975 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.77■□□□□ 0.6
Usp53P15975 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp53P15975 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Usp53P15975 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp53P15975 Gm44357-201ENSMUST00000195897 142 ntBASIC18.77■□□□□ 0.6
Usp53P15975 Gm19658-201ENSMUST00000196231 138 ntBASIC18.77■□□□□ 0.6
Usp53P15975 Gm44367-201ENSMUST00000196836 138 ntBASIC18.77■□□□□ 0.6
Usp53P15975 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.77■□□□□ 0.6
Usp53P15975 Gm44350-201ENSMUST00000197197 138 ntBASIC18.77■□□□□ 0.6
Usp53P15975 Gm44390-201ENSMUST00000197533 144 ntBASIC18.77■□□□□ 0.6
Usp53P15975 Gm44313-201ENSMUST00000198018 138 ntBASIC18.77■□□□□ 0.6
Usp53P15975 Gm44486-201ENSMUST00000198508 138 ntBASIC18.77■□□□□ 0.6
Usp53P15975 Gm44314-201ENSMUST00000199263 138 ntBASIC18.77■□□□□ 0.6
Usp53P15975 Gm44394-201ENSMUST00000199558 138 ntBASIC18.77■□□□□ 0.6
Usp53P15975 Gm44484-201ENSMUST00000199873 138 ntBASIC18.77■□□□□ 0.6
Usp53P15975 Gm44466-201ENSMUST00000200264 138 ntBASIC18.77■□□□□ 0.6
Usp53P15975 Gm44359-201ENSMUST00000200671 138 ntBASIC18.77■□□□□ 0.6
Usp53P15975 Mzt1-203ENSMUST00000227948 952 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms