Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.29■□□□□ 0.04
Nid1P10493 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Nid1P10493 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.29■□□□□ 0.04
Nid1P10493 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.29■□□□□ 0.04
Nid1P10493 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nid1P10493 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nid1P10493 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nid1P10493 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nid1P10493 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nid1P10493 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nid1P10493 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nid1P10493 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nid1P10493 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.28■□□□□ 0.04
Nid1P10493 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nid1P10493 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nid1P10493 Gm15565-201ENSMUST00000118890 427 ntBASIC15.28■□□□□ 0.04
Nid1P10493 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nid1P10493 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.28■□□□□ 0.04
Nid1P10493 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nid1P10493 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nid1P10493 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nid1P10493 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nid1P10493 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nid1P10493 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nid1P10493 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nid1P10493 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nid1P10493 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nid1P10493 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nid1P10493 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.28■□□□□ 0.04
Nid1P10493 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nid1P10493 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nid1P10493 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nid1P10493 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nid1P10493 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nid1P10493 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.27■□□□□ 0.04
Nid1P10493 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nid1P10493 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nid1P10493 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nid1P10493 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Nid1P10493 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nid1P10493 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nid1P10493 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nid1P10493 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.27■□□□□ 0.04
Nid1P10493 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nid1P10493 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nid1P10493 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Nid1P10493 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nid1P10493 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.27■□□□□ 0.04
Nid1P10493 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nid1P10493 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Nid1P10493 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nid1P10493 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nid1P10493 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nid1P10493 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.27■□□□□ 0.03
Nid1P10493 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nid1P10493 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.27■□□□□ 0.03
Nid1P10493 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Nid1P10493 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nid1P10493 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Nid1P10493 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nid1P10493 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nid1P10493 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nid1P10493 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nid1P10493 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nid1P10493 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.26■□□□□ 0.03
Nid1P10493 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nid1P10493 Gm6433-201ENSMUST00000118634 875 ntBASIC15.26■□□□□ 0.03
Nid1P10493 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.26■□□□□ 0.03
Nid1P10493 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nid1P10493 Gm27389-201ENSMUST00000183622 195 ntBASIC15.26■□□□□ 0.03
Nid1P10493 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nid1P10493 Gm37722-201ENSMUST00000193757 208 ntBASIC15.26■□□□□ 0.03
Nid1P10493 Gm21559-201ENSMUST00000220638 855 ntBASIC15.26■□□□□ 0.03
Nid1P10493 Gm8587-201ENSMUST00000076538 843 ntBASIC15.26■□□□□ 0.03
Nid1P10493 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nid1P10493 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.26■□□□□ 0.03
Nid1P10493 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nid1P10493 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nid1P10493 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nid1P10493 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nid1P10493 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nid1P10493 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nid1P10493 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nid1P10493 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nid1P10493 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nid1P10493 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nid1P10493 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nid1P10493 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nid1P10493 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nid1P10493 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nid1P10493 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.25■□□□□ 0.03
Nid1P10493 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nid1P10493 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.25■□□□□ 0.03
Nid1P10493 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nid1P10493 Gm10252-201ENSMUST00000209541 832 ntBASIC15.25■□□□□ 0.03
Nid1P10493 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nid1P10493 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nid1P10493 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nid1P10493 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nid1P10493 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms