Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 CT009738.1-201ENSMUST00000219031 809 ntBASIC13.59□□□□□ -0.23
Ly6c1P0CW02 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.59□□□□□ -0.23
Ly6c1P0CW02 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ly6c1P0CW02 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Ly6c1P0CW02 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ly6c1P0CW02 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ly6c1P0CW02 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ly6c1P0CW02 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Ly6c1P0CW02 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ly6c1P0CW02 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ly6c1P0CW02 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ly6c1P0CW02 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Ly6c1P0CW02 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ly6c1P0CW02 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ly6c1P0CW02 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ly6c1P0CW02 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.56□□□□□ -0.24
Ly6c1P0CW02 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.56□□□□□ -0.24
Ly6c1P0CW02 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ly6c1P0CW02 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ly6c1P0CW02 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ly6c1P0CW02 Gm43930-201ENSMUST00000203868 845 ntBASIC13.56□□□□□ -0.24
Ly6c1P0CW02 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ly6c1P0CW02 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.56□□□□□ -0.24
Ly6c1P0CW02 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.56□□□□□ -0.24
Ly6c1P0CW02 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms