Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.26■□□□□ 0.03
Sod1P08228 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.26■□□□□ 0.03
Sod1P08228 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.26■□□□□ 0.03
Sod1P08228 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.26■□□□□ 0.03
Sod1P08228 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sod1P08228 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sod1P08228 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Sod1P08228 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sod1P08228 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Sod1P08228 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sod1P08228 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sod1P08228 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Sod1P08228 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.26■□□□□ 0.03
Sod1P08228 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Sod1P08228 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sod1P08228 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sod1P08228 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sod1P08228 Rarb-207ENSMUST00000225921 2756 ntBASIC15.25■□□□□ 0.03
Sod1P08228 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Sod1P08228 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sod1P08228 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sod1P08228 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sod1P08228 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.25■□□□□ 0.03
Sod1P08228 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sod1P08228 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sod1P08228 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sod1P08228 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Sod1P08228 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Sod1P08228 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sod1P08228 Gm25911-201ENSMUST00000157621 56 ntBASIC15.25■□□□□ 0.03
Sod1P08228 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.25■□□□□ 0.03
Sod1P08228 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.25■□□□□ 0.03
Sod1P08228 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.25■□□□□ 0.03
Sod1P08228 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.25■□□□□ 0.03
Sod1P08228 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sod1P08228 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sod1P08228 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.25■□□□□ 0.03
Sod1P08228 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Sod1P08228 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sod1P08228 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.25■□□□□ 0.03
Sod1P08228 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Sod1P08228 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sod1P08228 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.25■□□□□ 0.03
Sod1P08228 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Sod1P08228 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sod1P08228 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sod1P08228 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sod1P08228 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Sod1P08228 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sod1P08228 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sod1P08228 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Sod1P08228 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.24■□□□□ 0.03
Sod1P08228 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sod1P08228 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.24■□□□□ 0.03
Sod1P08228 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.24■□□□□ 0.03
Sod1P08228 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.24■□□□□ 0.03
Sod1P08228 Gm24513-201ENSMUST00000174964 138 ntBASIC15.24■□□□□ 0.03
Sod1P08228 Gm27397-201ENSMUST00000184997 107 ntBASIC15.24■□□□□ 0.03
Sod1P08228 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.24■□□□□ 0.03
Sod1P08228 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.24■□□□□ 0.03
Sod1P08228 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sod1P08228 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sod1P08228 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.24■□□□□ 0.03
Sod1P08228 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Sod1P08228 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sod1P08228 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Sod1P08228 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sod1P08228 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sod1P08228 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sod1P08228 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sod1P08228 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Sod1P08228 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.24■□□□□ 0.03
Sod1P08228 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sod1P08228 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sod1P08228 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.23■□□□□ 0.03
Sod1P08228 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Sod1P08228 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sod1P08228 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sod1P08228 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sod1P08228 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sod1P08228 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Sod1P08228 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sod1P08228 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sod1P08228 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sod1P08228 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sod1P08228 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sod1P08228 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sod1P08228 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.23■□□□□ 0.03
Sod1P08228 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Sod1P08228 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.23■□□□□ 0.03
Sod1P08228 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.23■□□□□ 0.03
Sod1P08228 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sod1P08228 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Sod1P08228 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sod1P08228 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sod1P08228 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sod1P08228 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.23■□□□□ 0.03
Sod1P08228 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sod1P08228 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Sod1P08228 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms