Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
P04224 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
P04224 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
P04224 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
P04224 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.34□□□□□ -0.11
P04224 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.34□□□□□ -0.11
P04224 Gm8495-201ENSMUST00000188740 694 ntBASIC14.34□□□□□ -0.11
P04224 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.34□□□□□ -0.11
P04224 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
P04224 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
P04224 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
P04224 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
P04224 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P04224 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P04224 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
P04224 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.33□□□□□ -0.11
P04224 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P04224 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
P04224 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P04224 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P04224 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P04224 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
P04224 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
P04224 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P04224 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P04224 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P04224 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P04224 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P04224 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P04224 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.33□□□□□ -0.12
P04224 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P04224 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P04224 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P04224 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.33□□□□□ -0.12
P04224 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.33□□□□□ -0.12
P04224 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P04224 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
P04224 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P04224 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
P04224 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.32□□□□□ -0.12
P04224 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P04224 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P04224 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
P04224 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
P04224 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P04224 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P04224 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P04224 Gm15375-201ENSMUST00000119510 849 ntBASIC14.32□□□□□ -0.12
P04224 Gm6576-201ENSMUST00000169678 883 ntBASIC14.32□□□□□ -0.12
P04224 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
P04224 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
P04224 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P04224 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P04224 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P04224 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.32□□□□□ -0.12
P04224 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P04224 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P04224 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
P04224 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P04224 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
P04224 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
P04224 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
P04224 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
P04224 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04224 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
P04224 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
P04224 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms