Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Col4a1P02463 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a1P02463 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a1P02463 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.93■□□□□ 0.78
Col4a1P02463 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a1P02463 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a1P02463 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a1P02463 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.93■□□□□ 0.78
Col4a1P02463 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a1P02463 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.93■□□□□ 0.78
Col4a1P02463 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a1P02463 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a1P02463 Mir3113-201ENSMUST00000175478 76 ntBASIC19.93■□□□□ 0.78
Col4a1P02463 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a1P02463 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a1P02463 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.93■□□□□ 0.78
Col4a1P02463 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a1P02463 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col4a1P02463 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Col4a1P02463 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Col4a1P02463 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC19.92■□□□□ 0.78
Col4a1P02463 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a1P02463 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC19.92■□□□□ 0.78
Col4a1P02463 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.92■□□□□ 0.78
Col4a1P02463 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Col4a1P02463 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Col4a1P02463 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Col4a1P02463 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a1P02463 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a1P02463 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a1P02463 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Col4a1P02463 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col4a1P02463 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.91■□□□□ 0.78
Col4a1P02463 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a1P02463 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.91■□□□□ 0.78
Col4a1P02463 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Col4a1P02463 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC19.91■□□□□ 0.78
Col4a1P02463 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a1P02463 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC19.91■□□□□ 0.78
Col4a1P02463 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Col4a1P02463 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a1P02463 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a1P02463 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a1P02463 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a1P02463 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a1P02463 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a1P02463 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col4a1P02463 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.91■□□□□ 0.78
Col4a1P02463 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Col4a1P02463 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC19.91■□□□□ 0.78
Col4a1P02463 Chchd1-203ENSMUST00000224633 557 ntBASIC19.91■□□□□ 0.78
Col4a1P02463 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.91■□□□□ 0.78
Col4a1P02463 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a1P02463 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a1P02463 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a1P02463 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a1P02463 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a1P02463 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.9■□□□□ 0.78
Col4a1P02463 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a1P02463 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.9■□□□□ 0.78
Col4a1P02463 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.9■□□□□ 0.78
Col4a1P02463 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a1P02463 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a1P02463 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a1P02463 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a1P02463 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col4a1P02463 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Col4a1P02463 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Col4a1P02463 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Col4a1P02463 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.89■□□□□ 0.78
Col4a1P02463 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Col4a1P02463 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a1P02463 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a1P02463 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a1P02463 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Col4a1P02463 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a1P02463 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a1P02463 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col4a1P02463 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Col4a1P02463 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Gm37153-201ENSMUST00000193637 231 ntBASIC19.88■□□□□ 0.77
Col4a1P02463 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Col4a1P02463 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col4a1P02463 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms