Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igh-VJ558P01758 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igh-VJ558P01758 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Mir770-201ENSMUST00000103252 94 ntBASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igh-VJ558P01758 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Igh-VJ558P01758 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Igh-VJ558P01758 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Igh-VJ558P01758 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Igh-VJ558P01758 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Igh-VJ558P01758 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Igh-VJ558P01758 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igh-VJ558P01758 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igh-VJ558P01758 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Gm9013-201ENSMUST00000132939 882 ntBASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Igh-VJ558P01758 Gm44430-201ENSMUST00000203376 995 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms