Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CopeO89079 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CopeO89079 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.83■□□□□ 0.28
CopeO89079 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CopeO89079 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CopeO89079 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.83■□□□□ 0.28
CopeO89079 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CopeO89079 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CopeO89079 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CopeO89079 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CopeO89079 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CopeO89079 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CopeO89079 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CopeO89079 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.82■□□□□ 0.28
CopeO89079 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.82■□□□□ 0.28
CopeO89079 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CopeO89079 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CopeO89079 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CopeO89079 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CopeO89079 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CopeO89079 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CopeO89079 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CopeO89079 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.81■□□□□ 0.28
CopeO89079 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CopeO89079 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CopeO89079 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CopeO89079 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CopeO89079 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.81■□□□□ 0.28
CopeO89079 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CopeO89079 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CopeO89079 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CopeO89079 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CopeO89079 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CopeO89079 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopeO89079 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CopeO89079 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopeO89079 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CopeO89079 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CopeO89079 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopeO89079 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopeO89079 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CopeO89079 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CopeO89079 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopeO89079 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopeO89079 Mir1199-201ENSMUST00000117015 119 ntBASIC16.8■□□□□ 0.28
CopeO89079 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopeO89079 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CopeO89079 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopeO89079 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CopeO89079 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopeO89079 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopeO89079 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.8■□□□□ 0.28
CopeO89079 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CopeO89079 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.8■□□□□ 0.28
CopeO89079 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.8■□□□□ 0.28
CopeO89079 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CopeO89079 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Prob1-201ENSMUST00000097619 3021 ntBASIC16.79■□□□□ 0.28
CopeO89079 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CopeO89079 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CopeO89079 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.79■□□□□ 0.28
CopeO89079 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.79■□□□□ 0.28
CopeO89079 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.79■□□□□ 0.28
CopeO89079 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.79■□□□□ 0.28
CopeO89079 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CopeO89079 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms