Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Abcd4O89016 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abcd4O89016 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abcd4O89016 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abcd4O89016 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abcd4O89016 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abcd4O89016 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abcd4O89016 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Abcd4O89016 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Abcd4O89016 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Abcd4O89016 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Abcd4O89016 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.73□□□□□ -0.05
Abcd4O89016 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Abcd4O89016 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Abcd4O89016 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Abcd4O89016 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Abcd4O89016 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Abcd4O89016 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Abcd4O89016 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Abcd4O89016 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd4O89016 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd4O89016 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd4O89016 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd4O89016 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Abcd4O89016 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd4O89016 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd4O89016 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Abcd4O89016 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd4O89016 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.72□□□□□ -0.05
Abcd4O89016 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.72□□□□□ -0.05
Abcd4O89016 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.72□□□□□ -0.05
Abcd4O89016 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Abcd4O89016 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd4O89016 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.72□□□□□ -0.05
Abcd4O89016 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Abcd4O89016 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Abcd4O89016 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd4O89016 Phf7-203ENSMUST00000226565 1971 ntBASIC14.72□□□□□ -0.05
Abcd4O89016 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd4O89016 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd4O89016 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd4O89016 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Abcd4O89016 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd4O89016 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd4O89016 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Abcd4O89016 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Abcd4O89016 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Abcd4O89016 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Abcd4O89016 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.72□□□□□ -0.05
Abcd4O89016 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd4O89016 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd4O89016 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd4O89016 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd4O89016 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd4O89016 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.71□□□□□ -0.05
Abcd4O89016 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Abcd4O89016 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Abcd4O89016 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd4O89016 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd4O89016 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd4O89016 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.71□□□□□ -0.05
Abcd4O89016 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.71□□□□□ -0.05
Abcd4O89016 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.71□□□□□ -0.05
Abcd4O89016 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.71□□□□□ -0.05
Abcd4O89016 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd4O89016 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd4O89016 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd4O89016 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd4O89016 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd4O89016 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd4O89016 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd4O89016 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Abcd4O89016 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Abcd4O89016 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Abcd4O89016 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Abcd4O89016 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Abcd4O89016 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
Abcd4O89016 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms