Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShdO88834 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
ShdO88834 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.66■□□□□ 0.26
ShdO88834 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShdO88834 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ShdO88834 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ShdO88834 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ShdO88834 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.65■□□□□ 0.26
ShdO88834 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ShdO88834 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.65■□□□□ 0.26
ShdO88834 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ShdO88834 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.65■□□□□ 0.26
ShdO88834 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ShdO88834 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
ShdO88834 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShdO88834 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShdO88834 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShdO88834 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ShdO88834 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShdO88834 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShdO88834 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.64■□□□□ 0.25
ShdO88834 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShdO88834 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShdO88834 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ShdO88834 Gm9013-201ENSMUST00000132939 882 ntBASIC16.64■□□□□ 0.25
ShdO88834 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.64■□□□□ 0.25
ShdO88834 Gm5587-201ENSMUST00000206270 674 ntBASIC16.64■□□□□ 0.25
ShdO88834 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.64■□□□□ 0.25
ShdO88834 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShdO88834 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShdO88834 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ShdO88834 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ShdO88834 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShdO88834 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ShdO88834 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ShdO88834 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ShdO88834 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ShdO88834 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.63■□□□□ 0.25
ShdO88834 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ShdO88834 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ShdO88834 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ShdO88834 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ShdO88834 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ShdO88834 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShdO88834 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShdO88834 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ShdO88834 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ShdO88834 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShdO88834 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ShdO88834 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.62■□□□□ 0.25
ShdO88834 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.62■□□□□ 0.25
ShdO88834 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ShdO88834 Gm6623-201ENSMUST00000173570 544 ntBASIC16.62■□□□□ 0.25
ShdO88834 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.62■□□□□ 0.25
ShdO88834 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
ShdO88834 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms