Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Tgfbr3O88393 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tgfbr3O88393 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.45■□□□□ 0.06
Tgfbr3O88393 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Tgfbr3O88393 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tgfbr3O88393 Gm36967-201ENSMUST00000193814 266 ntBASIC15.45■□□□□ 0.06
Tgfbr3O88393 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tgfbr3O88393 Gm9172-201ENSMUST00000212092 954 ntBASIC15.45■□□□□ 0.06
Tgfbr3O88393 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.45■□□□□ 0.06
Tgfbr3O88393 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tgfbr3O88393 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tgfbr3O88393 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tgfbr3O88393 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tgfbr3O88393 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tgfbr3O88393 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tgfbr3O88393 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tgfbr3O88393 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tgfbr3O88393 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tgfbr3O88393 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tgfbr3O88393 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tgfbr3O88393 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Tgfbr3O88393 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tgfbr3O88393 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tgfbr3O88393 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tgfbr3O88393 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tgfbr3O88393 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tgfbr3O88393 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.44■□□□□ 0.06
Tgfbr3O88393 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.44■□□□□ 0.06
Tgfbr3O88393 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tgfbr3O88393 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Tgfbr3O88393 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tgfbr3O88393 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.44■□□□□ 0.06
Tgfbr3O88393 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tgfbr3O88393 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tgfbr3O88393 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tgfbr3O88393 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tgfbr3O88393 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tgfbr3O88393 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tgfbr3O88393 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.44■□□□□ 0.06
Tgfbr3O88393 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.43■□□□□ 0.06
Tgfbr3O88393 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Gm4995-201ENSMUST00000117247 432 ntBASIC15.43■□□□□ 0.06
Tgfbr3O88393 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tgfbr3O88393 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Gm25406-201ENSMUST00000157599 105 ntBASIC15.43■□□□□ 0.06
Tgfbr3O88393 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Tgfbr3O88393 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.43■□□□□ 0.06
Tgfbr3O88393 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tgfbr3O88393 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Gm9727-201ENSMUST00000161387 555 ntBASIC15.42■□□□□ 0.06
Tgfbr3O88393 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.42■□□□□ 0.06
Tgfbr3O88393 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.42■□□□□ 0.06
Tgfbr3O88393 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tgfbr3O88393 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tgfbr3O88393 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tgfbr3O88393 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.41■□□□□ 0.06
Tgfbr3O88393 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tgfbr3O88393 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tgfbr3O88393 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tgfbr3O88393 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tgfbr3O88393 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.41■□□□□ 0.06
Tgfbr3O88393 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tgfbr3O88393 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tgfbr3O88393 Gm7222-201ENSMUST00000117512 906 ntBASIC15.41■□□□□ 0.06
Tgfbr3O88393 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Tgfbr3O88393 Gm2756-201ENSMUST00000195851 400 ntBASIC15.41■□□□□ 0.06
Tgfbr3O88393 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tgfbr3O88393 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms