Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.2■□□□□ 0.66
Slc4a4O88343 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.2■□□□□ 0.66
Slc4a4O88343 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.2■□□□□ 0.66
Slc4a4O88343 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.2■□□□□ 0.66
Slc4a4O88343 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Slc4a4O88343 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Slc4a4O88343 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
Slc4a4O88343 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc4a4O88343 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Slc4a4O88343 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc4a4O88343 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc4a4O88343 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc4a4O88343 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc4a4O88343 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc4a4O88343 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc4a4O88343 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.19■□□□□ 0.66
Slc4a4O88343 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc4a4O88343 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc4a4O88343 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc4a4O88343 Gm15165-201ENSMUST00000118140 502 ntBASIC19.19■□□□□ 0.66
Slc4a4O88343 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.19■□□□□ 0.66
Slc4a4O88343 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc4a4O88343 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc4a4O88343 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc4a4O88343 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc4a4O88343 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc4a4O88343 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc4a4O88343 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Slc4a4O88343 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc4a4O88343 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc4a4O88343 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc4a4O88343 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.18■□□□□ 0.66
Slc4a4O88343 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.18■□□□□ 0.66
Slc4a4O88343 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc4a4O88343 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc4a4O88343 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Slc4a4O88343 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc4a4O88343 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Slc4a4O88343 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc4a4O88343 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc4a4O88343 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc4a4O88343 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc4a4O88343 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc4a4O88343 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc4a4O88343 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc4a4O88343 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc4a4O88343 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc4a4O88343 Gm12644-201ENSMUST00000119935 606 ntBASIC19.17■□□□□ 0.66
Slc4a4O88343 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Slc4a4O88343 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.17■□□□□ 0.66
Slc4a4O88343 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.17■□□□□ 0.66
Slc4a4O88343 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc4a4O88343 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc4a4O88343 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Slc4a4O88343 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc4a4O88343 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc4a4O88343 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc4a4O88343 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Slc4a4O88343 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc4a4O88343 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc4a4O88343 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc4a4O88343 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Slc4a4O88343 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Slc4a4O88343 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc4a4O88343 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.16■□□□□ 0.66
Slc4a4O88343 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc4a4O88343 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.16■□□□□ 0.66
Slc4a4O88343 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.16■□□□□ 0.66
Slc4a4O88343 Gm27459-201ENSMUST00000184860 107 ntBASIC19.16■□□□□ 0.66
Slc4a4O88343 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Slc4a4O88343 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.16■□□□□ 0.66
Slc4a4O88343 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc4a4O88343 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc4a4O88343 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc4a4O88343 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc4a4O88343 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc4a4O88343 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc4a4O88343 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc4a4O88343 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc4a4O88343 Gm43347-201ENSMUST00000200226 580 ntBASIC19.15■□□□□ 0.66
Slc4a4O88343 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc4a4O88343 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc4a4O88343 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc4a4O88343 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.15■□□□□ 0.66
Slc4a4O88343 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms