Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Pdlim3O70209 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Pdlim3O70209 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.8□□□□□ -0.04
Pdlim3O70209 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pdlim3O70209 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim3O70209 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim3O70209 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim3O70209 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim3O70209 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim3O70209 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Pdlim3O70209 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim3O70209 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim3O70209 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.79□□□□□ -0.04
Pdlim3O70209 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim3O70209 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.79□□□□□ -0.04
Pdlim3O70209 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.79□□□□□ -0.04
Pdlim3O70209 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim3O70209 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim3O70209 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim3O70209 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim3O70209 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim3O70209 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Pdlim3O70209 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.79□□□□□ -0.04
Pdlim3O70209 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Pdlim3O70209 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.78□□□□□ -0.04
Pdlim3O70209 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.78□□□□□ -0.04
Pdlim3O70209 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.78□□□□□ -0.04
Pdlim3O70209 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.78□□□□□ -0.04
Pdlim3O70209 Gm12527-201ENSMUST00000117967 564 ntBASIC14.78□□□□□ -0.04
Pdlim3O70209 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pdlim3O70209 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pdlim3O70209 Gm7791-201ENSMUST00000219066 539 ntBASIC14.78□□□□□ -0.04
Pdlim3O70209 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.78□□□□□ -0.04
Pdlim3O70209 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.78□□□□□ -0.04
Pdlim3O70209 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Pdlim3O70209 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Pdlim3O70209 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim3O70209 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim3O70209 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim3O70209 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim3O70209 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim3O70209 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Pdlim3O70209 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim3O70209 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim3O70209 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Pdlim3O70209 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim3O70209 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim3O70209 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
Pdlim3O70209 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Pdlim3O70209 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim3O70209 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim3O70209 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim3O70209 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Pdlim3O70209 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Pdlim3O70209 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.76□□□□□ -0.05
Pdlim3O70209 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pdlim3O70209 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.76□□□□□ -0.05
Pdlim3O70209 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.76□□□□□ -0.05
Pdlim3O70209 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Pdlim3O70209 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Pdlim3O70209 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Pdlim3O70209 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.76□□□□□ -0.05
Pdlim3O70209 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms