Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Rpl35aO55142 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.15□□□□□ -0.46
Rpl35aO55142 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.15□□□□□ -0.46
Rpl35aO55142 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.15□□□□□ -0.46
Rpl35aO55142 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Rpl35aO55142 Gm27704-201ENSMUST00000185094 107 ntBASIC12.15□□□□□ -0.46
Rpl35aO55142 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.15□□□□□ -0.46
Rpl35aO55142 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rpl35aO55142 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.15□□□□□ -0.46
Rpl35aO55142 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.15□□□□□ -0.46
Rpl35aO55142 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rpl35aO55142 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
Rpl35aO55142 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpl35aO55142 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rpl35aO55142 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.15□□□□□ -0.47
Rpl35aO55142 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rpl35aO55142 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rpl35aO55142 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.14□□□□□ -0.47
Rpl35aO55142 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Rpl35aO55142 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rpl35aO55142 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.14□□□□□ -0.47
Rpl35aO55142 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Rpl35aO55142 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Rpl35aO55142 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.14□□□□□ -0.47
Rpl35aO55142 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.14□□□□□ -0.47
Rpl35aO55142 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rpl35aO55142 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rpl35aO55142 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Rpl35aO55142 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpl35aO55142 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rpl35aO55142 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.13□□□□□ -0.47
Rpl35aO55142 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.13□□□□□ -0.47
Rpl35aO55142 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Rpl35aO55142 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rpl35aO55142 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rpl35aO55142 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rpl35aO55142 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rpl35aO55142 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rpl35aO55142 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpl35aO55142 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rpl35aO55142 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rpl35aO55142 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rpl35aO55142 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Rpl35aO55142 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rpl35aO55142 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Rpl35aO55142 Gm44450-201ENSMUST00000199528 114 ntBASIC12.12□□□□□ -0.47
Rpl35aO55142 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms