Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.9■□□□□ 0.46
Trdmt1O55055 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdmt1O55055 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdmt1O55055 Gm18622-201ENSMUST00000219361 595 ntBASIC17.9■□□□□ 0.46
Trdmt1O55055 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.9■□□□□ 0.46
Trdmt1O55055 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdmt1O55055 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trdmt1O55055 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trdmt1O55055 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdmt1O55055 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdmt1O55055 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdmt1O55055 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trdmt1O55055 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdmt1O55055 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trdmt1O55055 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trdmt1O55055 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trdmt1O55055 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trdmt1O55055 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.89■□□□□ 0.45
Trdmt1O55055 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trdmt1O55055 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdmt1O55055 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdmt1O55055 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trdmt1O55055 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trdmt1O55055 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdmt1O55055 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
Trdmt1O55055 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trdmt1O55055 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trdmt1O55055 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdmt1O55055 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trdmt1O55055 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.88■□□□□ 0.45
Trdmt1O55055 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.88■□□□□ 0.45
Trdmt1O55055 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdmt1O55055 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdmt1O55055 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdmt1O55055 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trdmt1O55055 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdmt1O55055 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdmt1O55055 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdmt1O55055 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trdmt1O55055 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trdmt1O55055 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trdmt1O55055 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.87■□□□□ 0.45
Trdmt1O55055 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.87■□□□□ 0.45
Trdmt1O55055 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 Gm27646-201ENSMUST00000183989 110 ntBASIC17.87■□□□□ 0.45
Trdmt1O55055 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.87■□□□□ 0.45
Trdmt1O55055 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.87■□□□□ 0.45
Trdmt1O55055 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trdmt1O55055 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trdmt1O55055 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trdmt1O55055 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trdmt1O55055 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trdmt1O55055 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trdmt1O55055 Gm23935-201ENSMUST00000102303 57 ntBASIC17.86■□□□□ 0.45
Trdmt1O55055 Gm24270-201ENSMUST00000102326 57 ntBASIC17.86■□□□□ 0.45
Trdmt1O55055 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trdmt1O55055 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.86■□□□□ 0.45
Trdmt1O55055 Gm24245-201ENSMUST00000157318 57 ntBASIC17.86■□□□□ 0.45
Trdmt1O55055 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.86■□□□□ 0.45
Trdmt1O55055 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trdmt1O55055 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.86■□□□□ 0.45
Trdmt1O55055 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.86■□□□□ 0.45
Trdmt1O55055 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trdmt1O55055 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trdmt1O55055 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trdmt1O55055 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trdmt1O55055 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trdmt1O55055 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trdmt1O55055 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trdmt1O55055 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trdmt1O55055 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trdmt1O55055 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm24513-201ENSMUST00000174964 138 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.85■□□□□ 0.45
Trdmt1O55055 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.85■□□□□ 0.45
Trdmt1O55055 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms