Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SncaO55042 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.5□□□□□ -0.25
SncaO55042 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SncaO55042 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.5□□□□□ -0.25
SncaO55042 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.5□□□□□ -0.25
SncaO55042 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.5□□□□□ -0.25
SncaO55042 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SncaO55042 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SncaO55042 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.49□□□□□ -0.25
SncaO55042 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.49□□□□□ -0.25
SncaO55042 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
SncaO55042 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.49□□□□□ -0.25
SncaO55042 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
SncaO55042 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SncaO55042 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SncaO55042 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SncaO55042 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.48□□□□□ -0.25
SncaO55042 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.48□□□□□ -0.25
SncaO55042 Gm13168-201ENSMUST00000121771 632 ntBASIC13.48□□□□□ -0.25
SncaO55042 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
SncaO55042 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.48□□□□□ -0.25
SncaO55042 Gm7791-201ENSMUST00000219066 539 ntBASIC13.48□□□□□ -0.25
SncaO55042 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SncaO55042 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.48□□□□□ -0.25
SncaO55042 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SncaO55042 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.48□□□□□ -0.25
SncaO55042 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SncaO55042 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
SncaO55042 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SncaO55042 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.47□□□□□ -0.25
SncaO55042 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.47□□□□□ -0.25
SncaO55042 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SncaO55042 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms