Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Copb2O55029 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Copb2O55029 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.68■□□□□ 0.58
Copb2O55029 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Copb2O55029 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Copb2O55029 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Copb2O55029 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Copb2O55029 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Copb2O55029 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Copb2O55029 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb2O55029 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb2O55029 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb2O55029 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb2O55029 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb2O55029 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb2O55029 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb2O55029 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb2O55029 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Copb2O55029 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.67■□□□□ 0.58
Copb2O55029 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.67■□□□□ 0.58
Copb2O55029 Gm6296-201ENSMUST00000222599 943 ntBASIC18.67■□□□□ 0.58
Copb2O55029 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb2O55029 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb2O55029 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb2O55029 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb2O55029 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Copb2O55029 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb2O55029 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Copb2O55029 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb2O55029 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Copb2O55029 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Copb2O55029 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Copb2O55029 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb2O55029 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Copb2O55029 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Copb2O55029 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.66■□□□□ 0.58
Copb2O55029 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Copb2O55029 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb2O55029 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb2O55029 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Copb2O55029 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.66■□□□□ 0.58
Copb2O55029 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.66■□□□□ 0.58
Copb2O55029 Gm36967-201ENSMUST00000193814 266 ntBASIC18.66■□□□□ 0.58
Copb2O55029 Gm7506-201ENSMUST00000207758 815 ntBASIC18.66■□□□□ 0.58
Copb2O55029 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Copb2O55029 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.66■□□□□ 0.58
Copb2O55029 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.66■□□□□ 0.58
Copb2O55029 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb2O55029 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Copb2O55029 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Copb2O55029 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb2O55029 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb2O55029 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Copb2O55029 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Copb2O55029 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Copb2O55029 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Copb2O55029 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.65■□□□□ 0.58
Copb2O55029 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Copb2O55029 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Copb2O55029 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Copb2O55029 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Copb2O55029 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Copb2O55029 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Copb2O55029 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.65■□□□□ 0.58
Copb2O55029 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.65■□□□□ 0.58
Copb2O55029 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Copb2O55029 Gm6376-201ENSMUST00000209407 580 ntBASIC18.65■□□□□ 0.58
Copb2O55029 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.65■□□□□ 0.58
Copb2O55029 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.65■□□□□ 0.58
Copb2O55029 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Copb2O55029 Rps4l-201ENSMUST00000071745 943 ntBASIC18.65■□□□□ 0.58
Copb2O55029 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.65■□□□□ 0.58
Copb2O55029 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Copb2O55029 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.65■□□□□ 0.58
Copb2O55029 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Copb2O55029 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Copb2O55029 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Copb2O55029 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Copb2O55029 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Copb2O55029 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb2O55029 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb2O55029 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb2O55029 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Copb2O55029 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb2O55029 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb2O55029 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb2O55029 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Copb2O55029 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb2O55029 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb2O55029 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Copb2O55029 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Copb2O55029 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb2O55029 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.64■□□□□ 0.57
Copb2O55029 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Copb2O55029 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb2O55029 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Copb2O55029 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Copb2O55029 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb2O55029 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Copb2O55029 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms