Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.92■□□□□ 0.46
Prom1O54990 Gm27702-201ENSMUST00000184512 56 ntBASIC17.92■□□□□ 0.46
Prom1O54990 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.92■□□□□ 0.46
Prom1O54990 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.92■□□□□ 0.46
Prom1O54990 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Prom1O54990 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Prom1O54990 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prom1O54990 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prom1O54990 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prom1O54990 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prom1O54990 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prom1O54990 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Prom1O54990 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.91■□□□□ 0.46
Prom1O54990 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prom1O54990 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.91■□□□□ 0.46
Prom1O54990 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.91■□□□□ 0.46
Prom1O54990 Gm8655-201ENSMUST00000221159 852 ntBASIC17.91■□□□□ 0.46
Prom1O54990 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prom1O54990 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prom1O54990 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prom1O54990 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Prom1O54990 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prom1O54990 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.91■□□□□ 0.46
Prom1O54990 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Prom1O54990 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.9■□□□□ 0.46
Prom1O54990 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prom1O54990 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prom1O54990 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prom1O54990 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.9■□□□□ 0.46
Prom1O54990 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.9■□□□□ 0.46
Prom1O54990 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Prom1O54990 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prom1O54990 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prom1O54990 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prom1O54990 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prom1O54990 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.9■□□□□ 0.46
Prom1O54990 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prom1O54990 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prom1O54990 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prom1O54990 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Prom1O54990 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Prom1O54990 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Prom1O54990 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Prom1O54990 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Prom1O54990 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prom1O54990 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Prom1O54990 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prom1O54990 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Prom1O54990 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prom1O54990 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prom1O54990 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prom1O54990 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prom1O54990 Gm14140-201ENSMUST00000119999 995 ntBASIC17.89■□□□□ 0.45
Prom1O54990 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.89■□□□□ 0.45
Prom1O54990 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.89■□□□□ 0.45
Prom1O54990 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.89■□□□□ 0.45
Prom1O54990 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Prom1O54990 Gm43575-201ENSMUST00000196420 516 ntBASIC17.89■□□□□ 0.45
Prom1O54990 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.89■□□□□ 0.45
Prom1O54990 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.89■□□□□ 0.45
Prom1O54990 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.89■□□□□ 0.45
Prom1O54990 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prom1O54990 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prom1O54990 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Prom1O54990 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prom1O54990 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prom1O54990 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prom1O54990 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Prom1O54990 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Prom1O54990 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prom1O54990 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Prom1O54990 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prom1O54990 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Prom1O54990 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prom1O54990 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prom1O54990 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prom1O54990 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Prom1O54990 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prom1O54990 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Prom1O54990 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Prom1O54990 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Prom1O54990 Gm2213-201ENSMUST00000197485 688 ntBASIC17.88■□□□□ 0.45
Prom1O54990 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.88■□□□□ 0.45
Prom1O54990 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.88■□□□□ 0.45
Prom1O54990 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prom1O54990 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prom1O54990 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Prom1O54990 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Prom1O54990 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prom1O54990 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prom1O54990 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Prom1O54990 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms