Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ChkaO54804 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.48■□□□□ 0.23
ChkaO54804 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.48■□□□□ 0.23
ChkaO54804 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ChkaO54804 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.47■□□□□ 0.23
ChkaO54804 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ChkaO54804 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ChkaO54804 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 Gm11336-201ENSMUST00000118168 334 ntBASIC16.47■□□□□ 0.23
ChkaO54804 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.47■□□□□ 0.23
ChkaO54804 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ChkaO54804 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.47■□□□□ 0.23
ChkaO54804 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.47■□□□□ 0.23
ChkaO54804 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ChkaO54804 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.46■□□□□ 0.23
ChkaO54804 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ChkaO54804 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ChkaO54804 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ChkaO54804 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ChkaO54804 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ChkaO54804 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ChkaO54804 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
ChkaO54804 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ChkaO54804 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ChkaO54804 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.46■□□□□ 0.23
ChkaO54804 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.46■□□□□ 0.23
ChkaO54804 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.46■□□□□ 0.23
ChkaO54804 Mir6982-201ENSMUST00000184354 68 ntBASIC16.46■□□□□ 0.23
ChkaO54804 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ChkaO54804 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ChkaO54804 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ChkaO54804 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ChkaO54804 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ChkaO54804 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ChkaO54804 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ChkaO54804 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ChkaO54804 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.22
ChkaO54804 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
ChkaO54804 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ChkaO54804 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ChkaO54804 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
ChkaO54804 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ChkaO54804 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ChkaO54804 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ChkaO54804 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ChkaO54804 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.45■□□□□ 0.22
ChkaO54804 Gm43799-201ENSMUST00000201845 579 ntBASIC16.45■□□□□ 0.22
ChkaO54804 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ChkaO54804 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ChkaO54804 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ChkaO54804 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ChkaO54804 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ChkaO54804 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ChkaO54804 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ChkaO54804 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ChkaO54804 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ChkaO54804 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
ChkaO54804 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.45■□□□□ 0.22
ChkaO54804 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.45■□□□□ 0.22
ChkaO54804 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ChkaO54804 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ChkaO54804 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ChkaO54804 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ChkaO54804 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ChkaO54804 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ChkaO54804 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
ChkaO54804 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ChkaO54804 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ChkaO54804 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ChkaO54804 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ChkaO54804 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
ChkaO54804 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ChkaO54804 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ChkaO54804 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.44■□□□□ 0.22
ChkaO54804 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.44■□□□□ 0.22
ChkaO54804 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.44■□□□□ 0.22
ChkaO54804 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ChkaO54804 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.44■□□□□ 0.22
ChkaO54804 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.44■□□□□ 0.22
ChkaO54804 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ChkaO54804 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ChkaO54804 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ChkaO54804 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
ChkaO54804 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.44■□□□□ 0.22
ChkaO54804 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms