Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Limk2O54785 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limk2O54785 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limk2O54785 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limk2O54785 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.51■□□□□ 0.23
Limk2O54785 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
Limk2O54785 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limk2O54785 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Limk2O54785 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Limk2O54785 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Limk2O54785 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Limk2O54785 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.51■□□□□ 0.23
Limk2O54785 Gm28659-201ENSMUST00000188013 759 ntBASIC16.51■□□□□ 0.23
Limk2O54785 Birc2-201ENSMUST00000054878 378 ntBASIC16.51■□□□□ 0.23
Limk2O54785 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limk2O54785 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limk2O54785 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limk2O54785 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limk2O54785 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.51■□□□□ 0.23
Limk2O54785 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limk2O54785 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Limk2O54785 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.51■□□□□ 0.23
Limk2O54785 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Limk2O54785 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limk2O54785 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limk2O54785 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Limk2O54785 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Limk2O54785 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limk2O54785 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limk2O54785 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Limk2O54785 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Limk2O54785 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Limk2O54785 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Limk2O54785 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Limk2O54785 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.5■□□□□ 0.23
Limk2O54785 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.5■□□□□ 0.23
Limk2O54785 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limk2O54785 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limk2O54785 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.5■□□□□ 0.23
Limk2O54785 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limk2O54785 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Limk2O54785 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Limk2O54785 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Limk2O54785 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Limk2O54785 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Limk2O54785 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Limk2O54785 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limk2O54785 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limk2O54785 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Limk2O54785 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Limk2O54785 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Limk2O54785 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Limk2O54785 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Limk2O54785 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 Gm10052-201ENSMUST00000168019 960 ntBASIC16.49■□□□□ 0.23
Limk2O54785 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
Limk2O54785 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.49■□□□□ 0.23
Limk2O54785 Gm44430-201ENSMUST00000203376 995 ntBASIC16.49■□□□□ 0.23
Limk2O54785 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 Gm7729-201ENSMUST00000050143 801 ntBASIC16.49■□□□□ 0.23
Limk2O54785 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
Limk2O54785 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Limk2O54785 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Limk2O54785 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Limk2O54785 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Limk2O54785 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.48■□□□□ 0.23
Limk2O54785 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Limk2O54785 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.48■□□□□ 0.23
Limk2O54785 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Limk2O54785 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Limk2O54785 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.48■□□□□ 0.23
Limk2O54785 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Limk2O54785 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Limk2O54785 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Limk2O54785 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.48■□□□□ 0.23
Limk2O54785 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.48■□□□□ 0.23
Limk2O54785 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.48■□□□□ 0.23
Limk2O54785 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Limk2O54785 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.48■□□□□ 0.23
Limk2O54785 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Limk2O54785 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Limk2O54785 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Limk2O54785 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Limk2O54785 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Limk2O54785 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Limk2O54785 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 488.3 ms