Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Per1O35973 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Per1O35973 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.62■□□□□ 0.41
Per1O35973 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.62■□□□□ 0.41
Per1O35973 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Per1O35973 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Per1O35973 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Per1O35973 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Per1O35973 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Per1O35973 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Per1O35973 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Per1O35973 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Per1O35973 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Per1O35973 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Per1O35973 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Per1O35973 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.62■□□□□ 0.41
Per1O35973 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Per1O35973 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Per1O35973 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per1O35973 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per1O35973 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per1O35973 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per1O35973 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per1O35973 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per1O35973 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.61■□□□□ 0.41
Per1O35973 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Per1O35973 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Per1O35973 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.61■□□□□ 0.41
Per1O35973 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per1O35973 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per1O35973 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per1O35973 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Per1O35973 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Per1O35973 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Per1O35973 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Per1O35973 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per1O35973 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per1O35973 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Per1O35973 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per1O35973 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per1O35973 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Per1O35973 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Per1O35973 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.6■□□□□ 0.41
Per1O35973 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.6■□□□□ 0.41
Per1O35973 Gm12497-201ENSMUST00000138778 237 ntBASIC17.6■□□□□ 0.41
Per1O35973 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.6■□□□□ 0.41
Per1O35973 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per1O35973 Gm6296-201ENSMUST00000222599 943 ntBASIC17.6■□□□□ 0.41
Per1O35973 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per1O35973 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Per1O35973 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Per1O35973 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per1O35973 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Per1O35973 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Per1O35973 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.6■□□□□ 0.41
Per1O35973 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per1O35973 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Per1O35973 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per1O35973 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Per1O35973 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per1O35973 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per1O35973 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Per1O35973 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Per1O35973 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.59■□□□□ 0.41
Per1O35973 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per1O35973 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per1O35973 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Per1O35973 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per1O35973 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per1O35973 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per1O35973 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC17.59■□□□□ 0.41
Per1O35973 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.59■□□□□ 0.41
Per1O35973 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per1O35973 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per1O35973 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per1O35973 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per1O35973 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per1O35973 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Per1O35973 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Per1O35973 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Per1O35973 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.58■□□□□ 0.41
Per1O35973 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Per1O35973 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Per1O35973 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Per1O35973 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Per1O35973 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Per1O35973 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.58■□□□□ 0.4
Per1O35973 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.58■□□□□ 0.4
Per1O35973 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Per1O35973 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
Per1O35973 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Per1O35973 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.58■□□□□ 0.4
Per1O35973 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.58■□□□□ 0.4
Per1O35973 Rps4l-201ENSMUST00000071745 943 ntBASIC17.58■□□□□ 0.4
Per1O35973 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Per1O35973 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Per1O35973 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Per1O35973 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Per1O35973 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Per1O35973 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms