Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Lsm2O35900 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Lsm2O35900 Actl10-202ENSMUST00000226583 1501 ntBASIC14.55□□□□□ -0.08
Lsm2O35900 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Lsm2O35900 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm2O35900 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm2O35900 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm2O35900 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm2O35900 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm2O35900 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm2O35900 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Lsm2O35900 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.54□□□□□ -0.08
Lsm2O35900 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.54□□□□□ -0.08
Lsm2O35900 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Lsm2O35900 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm2O35900 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm2O35900 Gm7638-201ENSMUST00000121348 967 ntBASIC14.54□□□□□ -0.08
Lsm2O35900 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm2O35900 Gm18958-201ENSMUST00000174258 762 ntBASIC14.54□□□□□ -0.08
Lsm2O35900 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm2O35900 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm2O35900 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.54□□□□□ -0.08
Lsm2O35900 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm2O35900 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.54□□□□□ -0.08
Lsm2O35900 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm2O35900 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Lsm2O35900 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.54□□□□□ -0.08
Lsm2O35900 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm2O35900 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Lsm2O35900 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm2O35900 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Lsm2O35900 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Lsm2O35900 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Lsm2O35900 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Gm12933-201ENSMUST00000120203 872 ntBASIC14.53□□□□□ -0.08
Lsm2O35900 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Gm27275-201ENSMUST00000184318 272 ntBASIC14.53□□□□□ -0.08
Lsm2O35900 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Lsm2O35900 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Lsm2O35900 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.53□□□□□ -0.08
Lsm2O35900 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Lsm2O35900 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.53□□□□□ -0.08
Lsm2O35900 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Lsm2O35900 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
Lsm2O35900 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.52□□□□□ -0.08
Lsm2O35900 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.52□□□□□ -0.08
Lsm2O35900 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.52□□□□□ -0.08
Lsm2O35900 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm2O35900 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm2O35900 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm2O35900 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm2O35900 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm2O35900 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.52□□□□□ -0.08
Lsm2O35900 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Lsm2O35900 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm2O35900 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm2O35900 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm2O35900 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm2O35900 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm2O35900 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm2O35900 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm2O35900 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm2O35900 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Lsm2O35900 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Lsm2O35900 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Lsm2O35900 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm2O35900 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm2O35900 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Lsm2O35900 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.51□□□□□ -0.09
Lsm2O35900 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm2O35900 Gm18284-201ENSMUST00000172604 624 ntBASIC14.51□□□□□ -0.09
Lsm2O35900 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.51□□□□□ -0.09
Lsm2O35900 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm2O35900 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.51□□□□□ -0.09
Lsm2O35900 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm2O35900 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Lsm2O35900 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.51□□□□□ -0.09
Lsm2O35900 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms