Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfsf11O35235 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.75□□□□□ -0.37
Tnfsf11O35235 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Gm12933-201ENSMUST00000120203 872 ntBASIC12.75□□□□□ -0.37
Tnfsf11O35235 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfsf11O35235 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.74□□□□□ -0.37
Tnfsf11O35235 Gm2559-201ENSMUST00000201323 363 ntBASIC12.74□□□□□ -0.37
Tnfsf11O35235 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.74□□□□□ -0.37
Tnfsf11O35235 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.74□□□□□ -0.37
Tnfsf11O35235 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Tnfsf11O35235 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.73□□□□□ -0.37
Tnfsf11O35235 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Tnfsf11O35235 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms