Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tcof1O08784 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tcof1O08784 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tcof1O08784 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Tcof1O08784 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.03■□□□□ 0.64
Tcof1O08784 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tcof1O08784 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tcof1O08784 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tcof1O08784 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Tcof1O08784 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Tcof1O08784 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tcof1O08784 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.02■□□□□ 0.64
Tcof1O08784 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
Tcof1O08784 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tcof1O08784 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tcof1O08784 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tcof1O08784 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tcof1O08784 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tcof1O08784 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tcof1O08784 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tcof1O08784 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.02■□□□□ 0.64
Tcof1O08784 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tcof1O08784 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tcof1O08784 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Tcof1O08784 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tcof1O08784 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tcof1O08784 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Tcof1O08784 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Tcof1O08784 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tcof1O08784 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tcof1O08784 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Tcof1O08784 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Tcof1O08784 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Tcof1O08784 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Tcof1O08784 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Tcof1O08784 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC19.01■□□□□ 0.63
Tcof1O08784 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.01■□□□□ 0.63
Tcof1O08784 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tcof1O08784 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Tcof1O08784 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tcof1O08784 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tcof1O08784 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tcof1O08784 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tcof1O08784 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tcof1O08784 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tcof1O08784 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tcof1O08784 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tcof1O08784 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tcof1O08784 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Tcof1O08784 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tcof1O08784 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Tcof1O08784 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Tcof1O08784 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19■□□□□ 0.63
Tcof1O08784 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tcof1O08784 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tcof1O08784 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tcof1O08784 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tcof1O08784 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tcof1O08784 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19■□□□□ 0.63
Tcof1O08784 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19■□□□□ 0.63
Tcof1O08784 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
Tcof1O08784 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19■□□□□ 0.63
Tcof1O08784 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19■□□□□ 0.63
Tcof1O08784 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tcof1O08784 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tcof1O08784 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tcof1O08784 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Tcof1O08784 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tcof1O08784 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tcof1O08784 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tcof1O08784 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tcof1O08784 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.99■□□□□ 0.63
Tcof1O08784 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tcof1O08784 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.99■□□□□ 0.63
Tcof1O08784 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.99■□□□□ 0.63
Tcof1O08784 Gm15372-201ENSMUST00000120729 834 ntBASIC18.99■□□□□ 0.63
Tcof1O08784 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.99■□□□□ 0.63
Tcof1O08784 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tcof1O08784 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tcof1O08784 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tcof1O08784 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tcof1O08784 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tcof1O08784 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.98■□□□□ 0.63
Tcof1O08784 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms