Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc180J3QNE4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc180J3QNE4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC29.5■■■□□ 2.31
Ccdc180J3QNE4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc180J3QNE4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc180J3QNE4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc180J3QNE4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC29.5■■■□□ 2.31
Ccdc180J3QNE4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc180J3QNE4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc180J3QNE4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc180J3QNE4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc180J3QNE4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ccdc180J3QNE4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 AC174742.1-201ENSMUST00000218272 304 ntBASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 AC158538.2-201ENSMUST00000225455 906 ntBASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 Gm8839-201ENSMUST00000121279 1645 ntBASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC29.49■■■□□ 2.31
Ccdc180J3QNE4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ccdc180J3QNE4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ccdc180J3QNE4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Ccdc180J3QNE4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC29.48■■■□□ 2.31
Ccdc180J3QNE4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC29.48■■■□□ 2.31
Ccdc180J3QNE4 Gm9682-201ENSMUST00000197505 556 ntBASIC29.48■■■□□ 2.31
Ccdc180J3QNE4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ccdc180J3QNE4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC29.48■■■□□ 2.31
Ccdc180J3QNE4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ccdc180J3QNE4 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC29.47■■■□□ 2.31
Ccdc180J3QNE4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ccdc180J3QNE4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ccdc180J3QNE4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ccdc180J3QNE4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
Ccdc180J3QNE4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ccdc180J3QNE4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC29.47■■■□□ 2.31
Ccdc180J3QNE4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ccdc180J3QNE4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC29.47■■■□□ 2.31
Ccdc180J3QNE4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Ccdc180J3QNE4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC29.47■■■□□ 2.31
Ccdc180J3QNE4 AC147366.1-201ENSMUST00000227671 852 ntBASIC29.47■■■□□ 2.31
Ccdc180J3QNE4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
Ccdc180J3QNE4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Ccdc180J3QNE4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ccdc180J3QNE4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ccdc180J3QNE4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ccdc180J3QNE4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ccdc180J3QNE4 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ccdc180J3QNE4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ccdc180J3QNE4 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Ccdc180J3QNE4 Auts2-212ENSMUST00000178555 309 ntBASIC29.46■■■□□ 2.31
Ccdc180J3QNE4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC29.46■■■□□ 2.31
Ccdc180J3QNE4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ccdc180J3QNE4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ccdc180J3QNE4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ccdc180J3QNE4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Ccdc180J3QNE4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Ccdc180J3QNE4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC29.45■■■□□ 2.31
Ccdc180J3QNE4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Ccdc180J3QNE4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC29.45■■■□□ 2.31
Ccdc180J3QNE4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Ccdc180J3QNE4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
Ccdc180J3QNE4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Ccdc180J3QNE4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Ccdc180J3QNE4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Ccdc180J3QNE4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC29.44■■■□□ 2.3
Ccdc180J3QNE4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC29.44■■■□□ 2.3
Ccdc180J3QNE4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
Ccdc180J3QNE4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Ccdc180J3QNE4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Ccdc180J3QNE4 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Ccdc180J3QNE4 Gm6257-201ENSMUST00000163864 910 ntBASIC29.44■■■□□ 2.3
Ccdc180J3QNE4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Ccdc180J3QNE4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
Ccdc180J3QNE4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Ccdc180J3QNE4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Ccdc180J3QNE4 Gm4609-201ENSMUST00000106443 1002 ntBASIC29.43■■■□□ 2.3
Ccdc180J3QNE4 Gm5138-201ENSMUST00000113842 1002 ntBASIC29.43■■■□□ 2.3
Ccdc180J3QNE4 Gm15191-201ENSMUST00000117933 1000 ntBASIC29.43■■■□□ 2.3
Ccdc180J3QNE4 Gm12182-201ENSMUST00000118655 1008 ntBASIC29.43■■■□□ 2.3
Ccdc180J3QNE4 Gm13882-201ENSMUST00000120886 1002 ntBASIC29.43■■■□□ 2.3
Ccdc180J3QNE4 Gm10284-201ENSMUST00000145057 1005 ntBASIC29.43■■■□□ 2.3
Ccdc180J3QNE4 Gm10481-201ENSMUST00000179228 1002 ntBASIC29.43■■■□□ 2.3
Ccdc180J3QNE4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC29.43■■■□□ 2.3
Ccdc180J3QNE4 Gm2574-201ENSMUST00000181051 1002 ntBASIC29.43■■■□□ 2.3
Ccdc180J3QNE4 Gm3200-201ENSMUST00000181493 1002 ntBASIC29.43■■■□□ 2.3
Ccdc180J3QNE4 Gm8825-201ENSMUST00000182565 998 ntBASIC29.43■■■□□ 2.3
Ccdc180J3QNE4 Gm4518-201ENSMUST00000182638 718 ntBASIC29.43■■■□□ 2.3
Ccdc180J3QNE4 Gm8330-201ENSMUST00000182754 1008 ntBASIC29.43■■■□□ 2.3
Ccdc180J3QNE4 Gm4575-201ENSMUST00000182991 1002 ntBASIC29.43■■■□□ 2.3
Ccdc180J3QNE4 Gm8709-201ENSMUST00000183230 1012 ntBASIC29.43■■■□□ 2.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms