Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chrna9G3X8Z7 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
Chrna9G3X8Z7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chrna9G3X8Z7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chrna9G3X8Z7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chrna9G3X8Z7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chrna9G3X8Z7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chrna9G3X8Z7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chrna9G3X8Z7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Gm22697-201ENSMUST00000175194 63 ntBASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Prob1-201ENSMUST00000097619 3021 ntBASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chrna9G3X8Z7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Gm27389-201ENSMUST00000183622 195 ntBASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Mir6982-201ENSMUST00000184354 68 ntBASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.5■□□□□ 0.39
Chrna9G3X8Z7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna9G3X8Z7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.49■□□□□ 0.39
Chrna9G3X8Z7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna9G3X8Z7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna9G3X8Z7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna9G3X8Z7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Chrna9G3X8Z7 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Chrna9G3X8Z7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna9G3X8Z7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna9G3X8Z7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna9G3X8Z7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna9G3X8Z7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna9G3X8Z7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna9G3X8Z7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna9G3X8Z7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.49■□□□□ 0.39
Chrna9G3X8Z7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chrna9G3X8Z7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms