Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NpcdF8VQB8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NpcdF8VQB8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NpcdF8VQB8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NpcdF8VQB8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NpcdF8VQB8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NpcdF8VQB8 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NpcdF8VQB8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC19.55■□□□□ 0.72
NpcdF8VQB8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NpcdF8VQB8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.55■□□□□ 0.72
NpcdF8VQB8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NpcdF8VQB8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC19.55■□□□□ 0.72
NpcdF8VQB8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NpcdF8VQB8 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NpcdF8VQB8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NpcdF8VQB8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NpcdF8VQB8 Mir6956-201ENSMUST00000183598 62 ntBASIC19.54■□□□□ 0.72
NpcdF8VQB8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC19.54■□□□□ 0.72
NpcdF8VQB8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NpcdF8VQB8 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NpcdF8VQB8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC19.54■□□□□ 0.72
NpcdF8VQB8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NpcdF8VQB8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NpcdF8VQB8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NpcdF8VQB8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NpcdF8VQB8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NpcdF8VQB8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NpcdF8VQB8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NpcdF8VQB8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NpcdF8VQB8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NpcdF8VQB8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NpcdF8VQB8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.53■□□□□ 0.72
NpcdF8VQB8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NpcdF8VQB8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.53■□□□□ 0.72
NpcdF8VQB8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.53■□□□□ 0.72
NpcdF8VQB8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC19.53■□□□□ 0.72
NpcdF8VQB8 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.53■□□□□ 0.72
NpcdF8VQB8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC19.53■□□□□ 0.72
NpcdF8VQB8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NpcdF8VQB8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NpcdF8VQB8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NpcdF8VQB8 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NpcdF8VQB8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NpcdF8VQB8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.52■□□□□ 0.72
NpcdF8VQB8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.52■□□□□ 0.72
NpcdF8VQB8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NpcdF8VQB8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NpcdF8VQB8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
NpcdF8VQB8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NpcdF8VQB8 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.51■□□□□ 0.71
NpcdF8VQB8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NpcdF8VQB8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NpcdF8VQB8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NpcdF8VQB8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NpcdF8VQB8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NpcdF8VQB8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NpcdF8VQB8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NpcdF8VQB8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NpcdF8VQB8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NpcdF8VQB8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.51■□□□□ 0.71
NpcdF8VQB8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.51■□□□□ 0.71
NpcdF8VQB8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NpcdF8VQB8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NpcdF8VQB8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NpcdF8VQB8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NpcdF8VQB8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NpcdF8VQB8 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.51■□□□□ 0.71
NpcdF8VQB8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NpcdF8VQB8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
NpcdF8VQB8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NpcdF8VQB8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NpcdF8VQB8 Gm11764-201ENSMUST00000120221 623 ntBASIC19.5■□□□□ 0.71
NpcdF8VQB8 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.5■□□□□ 0.71
NpcdF8VQB8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.5■□□□□ 0.71
NpcdF8VQB8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NpcdF8VQB8 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NpcdF8VQB8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NpcdF8VQB8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
NpcdF8VQB8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NpcdF8VQB8 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NpcdF8VQB8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NpcdF8VQB8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms