Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.63■□□□□ 0.89
ScaperF8VQ70 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC20.63■□□□□ 0.89
ScaperF8VQ70 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ScaperF8VQ70 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ScaperF8VQ70 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ScaperF8VQ70 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.63■□□□□ 0.89
ScaperF8VQ70 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ScaperF8VQ70 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
ScaperF8VQ70 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ScaperF8VQ70 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ScaperF8VQ70 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ScaperF8VQ70 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.63■□□□□ 0.89
ScaperF8VQ70 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ScaperF8VQ70 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ScaperF8VQ70 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ScaperF8VQ70 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ScaperF8VQ70 Gm25990-201ENSMUST00000102440 86 ntBASIC20.62■□□□□ 0.89
ScaperF8VQ70 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ScaperF8VQ70 Gm7230-201ENSMUST00000173026 815 ntBASIC20.62■□□□□ 0.89
ScaperF8VQ70 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ScaperF8VQ70 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ScaperF8VQ70 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ScaperF8VQ70 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ScaperF8VQ70 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.62■□□□□ 0.89
ScaperF8VQ70 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ScaperF8VQ70 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ScaperF8VQ70 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ScaperF8VQ70 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ScaperF8VQ70 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ScaperF8VQ70 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ScaperF8VQ70 Gm4995-201ENSMUST00000117247 432 ntBASIC20.61■□□□□ 0.89
ScaperF8VQ70 Gm24513-201ENSMUST00000174964 138 ntBASIC20.61■□□□□ 0.89
ScaperF8VQ70 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
ScaperF8VQ70 Gm10576-201ENSMUST00000191927 825 ntBASIC20.61■□□□□ 0.89
ScaperF8VQ70 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC20.61■□□□□ 0.89
ScaperF8VQ70 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC20.61■□□□□ 0.89
ScaperF8VQ70 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.61■□□□□ 0.89
ScaperF8VQ70 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.61■□□□□ 0.89
ScaperF8VQ70 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ScaperF8VQ70 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ScaperF8VQ70 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ScaperF8VQ70 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.61■□□□□ 0.89
ScaperF8VQ70 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ScaperF8VQ70 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ScaperF8VQ70 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ScaperF8VQ70 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ScaperF8VQ70 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.61■□□□□ 0.89
ScaperF8VQ70 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Gm14494-201ENSMUST00000118786 435 ntBASIC20.6■□□□□ 0.89
ScaperF8VQ70 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Gm27397-201ENSMUST00000184997 107 ntBASIC20.6■□□□□ 0.89
ScaperF8VQ70 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.6■□□□□ 0.89
ScaperF8VQ70 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.6■□□□□ 0.89
ScaperF8VQ70 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ScaperF8VQ70 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Gm14822-201ENSMUST00000122247 291 ntBASIC20.59■□□□□ 0.89
ScaperF8VQ70 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ScaperF8VQ70 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ScaperF8VQ70 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.59■□□□□ 0.89
ScaperF8VQ70 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ScaperF8VQ70 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.59■□□□□ 0.89
ScaperF8VQ70 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.59■□□□□ 0.89
ScaperF8VQ70 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ScaperF8VQ70 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms