Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atf6F6VAN0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Atf6F6VAN0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Atf6F6VAN0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atf6F6VAN0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atf6F6VAN0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.76■□□□□ 0.27
Atf6F6VAN0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Atf6F6VAN0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6F6VAN0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Atf6F6VAN0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6F6VAN0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6F6VAN0 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6F6VAN0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.75■□□□□ 0.27
Atf6F6VAN0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Atf6F6VAN0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6F6VAN0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Atf6F6VAN0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.75■□□□□ 0.27
Atf6F6VAN0 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.75■□□□□ 0.27
Atf6F6VAN0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6F6VAN0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6F6VAN0 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.75■□□□□ 0.27
Atf6F6VAN0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Atf6F6VAN0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Atf6F6VAN0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Atf6F6VAN0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Gm10231-201ENSMUST00000181584 441 ntBASIC16.74■□□□□ 0.27
Atf6F6VAN0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Gm10175-202ENSMUST00000208752 441 ntBASIC16.74■□□□□ 0.27
Atf6F6VAN0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Atf6F6VAN0 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.73■□□□□ 0.27
Atf6F6VAN0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.73■□□□□ 0.27
Atf6F6VAN0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Atf6F6VAN0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.72■□□□□ 0.27
Atf6F6VAN0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Atf6F6VAN0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms