Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
C530025M09RikF6RGA8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
C530025M09RikF6RGA8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
C530025M09RikF6RGA8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
C530025M09RikF6RGA8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
C530025M09RikF6RGA8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
C530025M09RikF6RGA8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
C530025M09RikF6RGA8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
C530025M09RikF6RGA8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Gm14464-201ENSMUST00000119658 1254 ntBASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Zfp264-201ENSMUST00000208656 1563 ntBASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Odf3b-204ENSMUST00000227834 930 ntBASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
C530025M09RikF6RGA8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
C530025M09RikF6RGA8 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
C530025M09RikF6RGA8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
C530025M09RikF6RGA8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
C530025M09RikF6RGA8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
C530025M09RikF6RGA8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
C530025M09RikF6RGA8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
C530025M09RikF6RGA8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
C530025M09RikF6RGA8 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Gm45212-201ENSMUST00000205831 3403 ntBASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 App-207ENSMUST00000227737 2827 ntBASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
C530025M09RikF6RGA8 Gm715-201ENSMUST00000117865 831 ntBASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms