Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Zc3h13E9Q784 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Zc3h13E9Q784 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Zc3h13E9Q784 Gm43474-201ENSMUST00000196415 774 ntBASIC22.31■■□□□ 1.16
Zc3h13E9Q784 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Zc3h13E9Q784 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Zc3h13E9Q784 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Zc3h13E9Q784 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Zc3h13E9Q784 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Zc3h13E9Q784 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Zc3h13E9Q784 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Zc3h13E9Q784 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Zc3h13E9Q784 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Zc3h13E9Q784 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Zc3h13E9Q784 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC22.3■■□□□ 1.16
Zc3h13E9Q784 AC158538.2-201ENSMUST00000225455 906 ntBASIC22.3■■□□□ 1.16
Zc3h13E9Q784 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC22.3■■□□□ 1.16
Zc3h13E9Q784 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Zc3h13E9Q784 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
Zc3h13E9Q784 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Zc3h13E9Q784 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Zc3h13E9Q784 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
Zc3h13E9Q784 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC22.29■■□□□ 1.16
Zc3h13E9Q784 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Zc3h13E9Q784 H2-Pa-201ENSMUST00000182803 626 ntBASIC22.29■■□□□ 1.16
Zc3h13E9Q784 Mir6977-201ENSMUST00000184960 64 ntBASIC22.29■■□□□ 1.16
Zc3h13E9Q784 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Zc3h13E9Q784 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC22.29■■□□□ 1.16
Zc3h13E9Q784 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Zc3h13E9Q784 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Zc3h13E9Q784 AC119177.1-201ENSMUST00000227647 1332 ntBASIC22.29■■□□□ 1.16
Zc3h13E9Q784 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
Zc3h13E9Q784 Iqck-206ENSMUST00000208658 2891 ntBASIC22.29■■□□□ 1.16
Zc3h13E9Q784 Gm13365-201ENSMUST00000121188 973 ntBASIC22.28■■□□□ 1.16
Zc3h13E9Q784 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC22.28■■□□□ 1.16
Zc3h13E9Q784 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Zc3h13E9Q784 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Zc3h13E9Q784 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Zc3h13E9Q784 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Zc3h13E9Q784 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Zc3h13E9Q784 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Zc3h13E9Q784 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC22.28■■□□□ 1.16
Zc3h13E9Q784 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC22.28■■□□□ 1.16
Zc3h13E9Q784 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Zc3h13E9Q784 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Zc3h13E9Q784 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Zc3h13E9Q784 Fgf17-202ENSMUST00000227123 1336 ntBASIC22.28■■□□□ 1.16
Zc3h13E9Q784 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Zc3h13E9Q784 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Zc3h13E9Q784 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Zc3h13E9Q784 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Zc3h13E9Q784 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Zc3h13E9Q784 Gm6257-201ENSMUST00000163864 910 ntBASIC22.27■■□□□ 1.16
Zc3h13E9Q784 Gm5866-201ENSMUST00000177881 973 ntBASIC22.27■■□□□ 1.16
Zc3h13E9Q784 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Zc3h13E9Q784 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Zc3h13E9Q784 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Zc3h13E9Q784 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Zc3h13E9Q784 Gm5366-201ENSMUST00000215494 1338 ntBASIC22.27■■□□□ 1.16
Zc3h13E9Q784 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Zc3h13E9Q784 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Zc3h13E9Q784 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Zc3h13E9Q784 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Zc3h13E9Q784 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Zc3h13E9Q784 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC22.26■■□□□ 1.15
Zc3h13E9Q784 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC22.26■■□□□ 1.15
Zc3h13E9Q784 Gm7787-201ENSMUST00000216858 688 ntBASIC22.26■■□□□ 1.15
Zc3h13E9Q784 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Zc3h13E9Q784 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Zc3h13E9Q784 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Zc3h13E9Q784 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Zc3h13E9Q784 Nrn1-204ENSMUST00000224323 1779 ntBASIC22.26■■□□□ 1.15
Zc3h13E9Q784 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Zc3h13E9Q784 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Zc3h13E9Q784 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC22.26■■□□□ 1.15
Zc3h13E9Q784 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Zc3h13E9Q784 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Zc3h13E9Q784 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Zc3h13E9Q784 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Zc3h13E9Q784 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Zc3h13E9Q784 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Zc3h13E9Q784 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC22.24■■□□□ 1.15
Zc3h13E9Q784 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Zc3h13E9Q784 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms