Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC20.04■□□□□ 0.8
Ccdc85cE9Q6B2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Gm27301-201ENSMUST00000184012 127 ntBASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Gm7774-201ENSMUST00000200064 533 ntBASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Gm7787-201ENSMUST00000216858 688 ntBASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc85cE9Q6B2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Rprl2-201ENSMUST00000157150 290 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm4518-201ENSMUST00000182638 718 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm10293-201ENSMUST00000076317 1002 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm6316-201ENSMUST00000082064 1020 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc85cE9Q6B2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC20.02■□□□□ 0.79
Ccdc85cE9Q6B2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC20.02■□□□□ 0.79
Ccdc85cE9Q6B2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc85cE9Q6B2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc85cE9Q6B2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc85cE9Q6B2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc85cE9Q6B2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc85cE9Q6B2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Ccdc85cE9Q6B2 Gm12151-201ENSMUST00000121374 290 ntBASIC20.01■□□□□ 0.79
Ccdc85cE9Q6B2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc85cE9Q6B2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc85cE9Q6B2 Gm2423-201ENSMUST00000074863 733 ntBASIC20.01■□□□□ 0.79
Ccdc85cE9Q6B2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc85cE9Q6B2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc85cE9Q6B2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc85cE9Q6B2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc85cE9Q6B2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc85cE9Q6B2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Gm5177-201ENSMUST00000183092 997 ntBASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Gm5628-201ENSMUST00000222318 1049 ntBASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc85cE9Q6B2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms