Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhb9E9Q5G2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Gm7153-201ENSMUST00000117092 455 ntBASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhb9E9Q5G2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Gm27459-201ENSMUST00000184860 107 ntBASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb9E9Q5G2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Gm12644-201ENSMUST00000119935 606 ntBASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Mir6404-201ENSMUST00000183699 94 ntBASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Gm27741-201ENSMUST00000185060 237 ntBASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb9E9Q5G2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Pcdhb9E9Q5G2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms