Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.11□□□□□ -0.95
Herc1E9PZP8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Mir1982-201ENSMUST00000157368 74 ntBASIC9.11□□□□□ -0.95
Herc1E9PZP8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Herc1E9PZP8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC9.1□□□□□ -0.95
Herc1E9PZP8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Notumos-201ENSMUST00000151998 2659 ntBASIC9.1□□□□□ -0.95
Herc1E9PZP8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Gm6263-201ENSMUST00000120029 1342 ntBASIC9.1□□□□□ -0.95
Herc1E9PZP8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC9.1□□□□□ -0.95
Herc1E9PZP8 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Gm13294-201ENSMUST00000121757 1330 ntBASIC9.1□□□□□ -0.95
Herc1E9PZP8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Gm6858-201ENSMUST00000208582 1468 ntBASIC9.1□□□□□ -0.95
Herc1E9PZP8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Herc1E9PZP8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Gm5035-201ENSMUST00000215581 927 ntBASIC9.09□□□□□ -0.95
Herc1E9PZP8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC9.09□□□□□ -0.95
Herc1E9PZP8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Gm11918-201ENSMUST00000121660 179 ntBASIC9.09□□□□□ -0.95
Herc1E9PZP8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Gm9385-201ENSMUST00000117563 472 ntBASIC9.09□□□□□ -0.95
Herc1E9PZP8 Gm18753-201ENSMUST00000201000 566 ntBASIC9.09□□□□□ -0.95
Herc1E9PZP8 Mettl6-204ENSMUST00000227595 1027 ntBASIC9.09□□□□□ -0.95
Herc1E9PZP8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Gm9194-201ENSMUST00000220749 1447 ntBASIC9.09□□□□□ -0.95
Herc1E9PZP8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Gfra2-202ENSMUST00000227633 1480 ntBASIC9.09□□□□□ -0.95
Herc1E9PZP8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Herc1E9PZP8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Herc1E9PZP8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Herc1E9PZP8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc1E9PZP8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc1E9PZP8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc1E9PZP8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC9.08□□□□□ -0.96
Herc1E9PZP8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC9.08□□□□□ -0.96
Herc1E9PZP8 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Herc1E9PZP8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Herc1E9PZP8 Gm42853-201ENSMUST00000201273 1387 ntBASIC9.08□□□□□ -0.96
Herc1E9PZP8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc1E9PZP8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Herc1E9PZP8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Herc1E9PZP8 Gm44974-201ENSMUST00000206387 1279 ntBASIC9.08□□□□□ -0.96
Herc1E9PZP8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Herc1E9PZP8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Herc1E9PZP8 Gm45141-201ENSMUST00000206502 1888 ntBASIC9.08□□□□□ -0.96
Herc1E9PZP8 Fst-202ENSMUST00000223640 2612 ntBASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms