Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.24■□□□□ 0.19
Col6a3E9PWQ3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Col6a3E9PWQ3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.24■□□□□ 0.19
Col6a3E9PWQ3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a3E9PWQ3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Col6a3E9PWQ3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a3E9PWQ3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a3E9PWQ3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a3E9PWQ3 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.24■□□□□ 0.19
Col6a3E9PWQ3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a3E9PWQ3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a3E9PWQ3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a3E9PWQ3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col6a3E9PWQ3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Gm15693-201ENSMUST00000120470 637 ntBASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Rpph1-201ENSMUST00000175096 319 ntBASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Col6a3E9PWQ3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a3E9PWQ3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
Col6a3E9PWQ3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.22■□□□□ 0.19
Col6a3E9PWQ3 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.22■□□□□ 0.19
Col6a3E9PWQ3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col6a3E9PWQ3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a3E9PWQ3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a3E9PWQ3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.22■□□□□ 0.19
Col6a3E9PWQ3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC16.22■□□□□ 0.19
Col6a3E9PWQ3 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a3E9PWQ3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a3E9PWQ3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Col6a3E9PWQ3 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a3E9PWQ3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a3E9PWQ3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col6a3E9PWQ3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col6a3E9PWQ3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col6a3E9PWQ3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.21■□□□□ 0.18
Col6a3E9PWQ3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Col6a3E9PWQ3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 Gm15824-201ENSMUST00000119516 955 ntBASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 Gm23984-201ENSMUST00000157139 203 ntBASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 Gm15321-201ENSMUST00000121290 288 ntBASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 Mir8112-201ENSMUST00000184382 131 ntBASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
Col6a3E9PWQ3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.19■□□□□ 0.18
Col6a3E9PWQ3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms