Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.55□□□□□ -0.08
Shank1D3YZU1 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.55□□□□□ -0.08
Shank1D3YZU1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Shank1D3YZU1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Shank1D3YZU1 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.54□□□□□ -0.08
Shank1D3YZU1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.54□□□□□ -0.08
Shank1D3YZU1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.54□□□□□ -0.08
Shank1D3YZU1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Gm8097-201ENSMUST00000117903 829 ntBASIC14.53□□□□□ -0.08
Shank1D3YZU1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.53□□□□□ -0.08
Shank1D3YZU1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Gm5682-201ENSMUST00000173402 505 ntBASIC14.53□□□□□ -0.08
Shank1D3YZU1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.53□□□□□ -0.08
Shank1D3YZU1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Shank1D3YZU1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.52□□□□□ -0.08
Shank1D3YZU1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Shank1D3YZU1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Shank1D3YZU1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Shank1D3YZU1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shank1D3YZU1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shank1D3YZU1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Shank1D3YZU1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shank1D3YZU1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Shank1D3YZU1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Shank1D3YZU1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shank1D3YZU1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shank1D3YZU1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Shank1D3YZU1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shank1D3YZU1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shank1D3YZU1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shank1D3YZU1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shank1D3YZU1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shank1D3YZU1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shank1D3YZU1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Shank1D3YZU1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Shank1D3YZU1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.51□□□□□ -0.09
Shank1D3YZU1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Gm26308-201ENSMUST00000157768 69 ntBASIC14.51□□□□□ -0.09
Shank1D3YZU1 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Shank1D3YZU1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms