Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Gm8515-201ENSMUST00000194852 576 ntBASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 AC147366.1-201ENSMUST00000227671 852 ntBASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Hmcn1D3YXG0 Gm34220-201ENSMUST00000223001 2709 ntBASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gm13226-201ENSMUST00000117838 404 ntBASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gm15693-201ENSMUST00000120470 637 ntBASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gm37277-201ENSMUST00000194052 1111 ntBASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gm9194-201ENSMUST00000220749 1447 ntBASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gm5366-201ENSMUST00000215494 1338 ntBASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gm18057-201ENSMUST00000208220 503 ntBASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gm9063-201ENSMUST00000223299 582 ntBASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gm15236-201ENSMUST00000117309 379 ntBASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gm11185-201ENSMUST00000117732 1007 ntBASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gm18934-201ENSMUST00000216671 1044 ntBASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Hmcn1D3YXG0 Gm6858-201ENSMUST00000208582 1468 ntBASIC4.67□□□□□ -1.66
Hmcn1D3YXG0 Gm45906-201ENSMUST00000208911 1430 ntBASIC4.67□□□□□ -1.66
Hmcn1D3YXG0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmcn1D3YXG0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Hmcn1D3YXG0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmcn1D3YXG0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmcn1D3YXG0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmcn1D3YXG0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmcn1D3YXG0 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC4.67□□□□□ -1.66
Hmcn1D3YXG0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmcn1D3YXG0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms