Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm12887B1AVM1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Asic1-205ENSMUST00000228185 1818 ntBASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm12887B1AVM1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Gm10517-202ENSMUST00000192970 758 ntBASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Gm2559-201ENSMUST00000201323 363 ntBASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Gm12887B1AVM1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Gm12887B1AVM1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.29
Gm12887B1AVM1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms